Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:129782356-129851443

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psph 5 129765558 to 129787253 21695 - protein coding gene phosphoserine phosphatase
Cpgi16680 5 129786969 to 129787811 842 CpG island CpG island 16680
Tssr49015 5 129786990 to 129787058 68 + TSS region transcription start site region 49015
Tssr53492 5 129787158 to 129787173 15 - TSS region transcription start site region 53492
Tssr53493 5 129787175 to 129787259 84 - TSS region transcription start site region 53493
Cct6a 5 129787356 to 129846443 59087 + protein coding gene chaperonin containing Tcp1, subunit 6a (zeta)
Tssr49016 5 129787365 to 129787388 23 + TSS region transcription start site region 49016
Tssr49017 5 129787390 to 129787413 23 + TSS region transcription start site region 49017
Gm23245 5 129789539 to 129789673 134 + snoRNA gene predicted gene, 23245
Tssr49018 5 129791800 to 129791812 12 + TSS region transcription start site region 49018
Tssr49019 5 129794350 to 129794369 19 + TSS region transcription start site region 49019
Snora15 5 129794561 to 129794676 115 + snoRNA gene small nucleolar RNA, H/ACA box 15
Tssr49020 5 129845845 to 129845863 18 + TSS region transcription start site region 49020
Cpgi16681 5 129846862 to 129847144 282 CpG island CpG island 16681
Tssr49021 5 129846980 to 129847036 56 + TSS region transcription start site region 49021
Sumf2 5 129846990 to 129863951 16961 + protein coding gene sulfatase modifying factor 2