Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:129101596-129513013

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgrd1 5 129096750 to 129204599 107849 + protein coding gene adhesion G protein-coupled receptor D1
Cpgi16670 5 129111533 to 129111714 181 CpG island CpG island 16670
Gm46923 5 129113378 to 129117899 4521 - lncRNA gene predicted gene, 46923
Tssr48999 5 129114998 to 129115014 16 + TSS region transcription start site region 48999
Tssr53482 5 129116608 to 129116622 14 - TSS region transcription start site region 53482
Rps16-ps2 5 129128077 to 129128517 440 - pseudogene ribosomal protein S16, pseudogene 2
Tssr53483 5 129128563 to 129128575 12 - TSS region transcription start site region 53483
D5Mit163 5 129139863 to 129140004 141 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 163
Tssr49000 5 129160758 to 129160761 3 + TSS region transcription start site region 49000
Tssr49001 5 129174275 to 129174322 47 + TSS region transcription start site region 49001
Tssr49002 5 129204327 to 129204332 5 + TSS region transcription start site region 49002
D5Mit427 5 129212105 to 129212215 110 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 427
Tssr49003 5 129234182 to 129234186 4 + TSS region transcription start site region 49003
Tssr49004 5 129235034 to 129235038 4 + TSS region transcription start site region 49004
D5Mit339 5 129242998 to 129243112 114 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 339
Cpgi16671 5 129264498 to 129264667 169 CpG island CpG island 16671
Gm34145 5 129306596 to 129308013 1417 - lncRNA gene predicted gene, 34145
Tssr49005 5 129363543 to 129363581 38 + TSS region transcription start site region 49005
Gm43001 5 129363562 to 129364721 1159 + lincRNA gene predicted gene 43001
Gm34468 5 129493231 to 129497417 4186 + lncRNA gene predicted gene, 34468
Gm40333 5 129493873 to 129494379 506 - lncRNA gene predicted gene, 40333
Gm40332 5 129500250 to 129501163 913 - lncRNA gene predicted gene, 40332
Cpgi16672 5 129500747 to 129502293 1546 CpG island CpG island 16672
Tssr49006 5 129501223 to 129501253 30 + TSS region transcription start site region 49006
Sfswap 5 129501231 to 129571384 70153 + protein coding gene splicing factor SWAP
Tssr49007 5 129511179 to 129511182 3 + TSS region transcription start site region 49007