Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:128737791-128973486

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Piwil1	5	128736070 to 128755474	19404	+	protein coding gene	piwi-like RNA-mediated gene silencing 1
Tssr48987	5	128755127 to 128755143	16	+	TSS region	transcription start site region 48987
Tssr1645	5	128757303 to 128757309	6	+	TSS region	transcription start site region 1645
Rimbp2	5	128757791 to 128953486	195695	-	protein coding gene	RIMS binding protein 2
Gm42875	5	128769524 to 128777837	8313	+	antisense lncRNA gene	predicted gene 42875
Gm42871	5	128774525 to 128775550	1025	-	sense intronic lncRNA gene	predicted gene 42871
Cpgi16666	5	128781710 to 128782378	668		CpG island	CpG island 16666
Tssr48988	5	128814349 to 128814350	1	+	TSS region	transcription start site region 48988
Gm34057	5	128817927 to 128821701	3774	+	lncRNA gene	predicted gene, 34057
Tssr53472	5	128819892 to 128819928	36	-	TSS region	transcription start site region 53472
Tssr53473	5	128820053 to 128820082	29	-	TSS region	transcription start site region 53473
Tssr53474	5	128904252 to 128904266	14	-	TSS region	transcription start site region 53474
Cpgi16667	5	128952216 to 128952914	698		CpG island	CpG island 16667
Tssr53475	5	128953047 to 128953066	19	-	TSS region	transcription start site region 53475
Tssr53476	5	128953303 to 128953331	28	-	TSS region	transcription start site region 53476