Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:128587772-128748104

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5930412G12Rik 5 128579130 to 128600687 21557 - lincRNA gene RIKEN cDNA 5930412G12 gene
Gm42498 5 128596585 to 128597956 1371 - unclassified gene predicted gene 42498
Tssr48978 5 128596904 to 128596924 20 + TSS region transcription start site region 48978
Cpgi16662 5 128596959 to 128597204 245 CpG island CpG island 16662
Cpgi16663 5 128599739 to 128602521 2782 CpG island CpG island 16663
Tssr53469 5 128600642 to 128600673 31 - TSS region transcription start site region 53469
Tssr53470 5 128600674 to 128600706 32 - TSS region transcription start site region 53470
Tssr48979 5 128600800 to 128600816 16 + TSS region transcription start site region 48979
Tssr48980 5 128600821 to 128600828 7 + TSS region transcription start site region 48980
Tssr48981 5 128600830 to 128600848 18 + TSS region transcription start site region 48981
Fzd10 5 128601106 to 128604093 2987 + protein coding gene frizzled class receptor 10
Tssr48982 5 128603660 to 128603665 5 + TSS region transcription start site region 48982
Gm33931 5 128644147 to 128656806 12659 - lncRNA gene predicted gene, 33931
Cpgi16664 5 128667772 to 128668104 332 CpG island CpG island 16664
Gm33995 5 128705420 to 128709399 3979 - lncRNA gene predicted gene, 33995
Tssr1643 5 128717447 to 128717450 3 + TSS region transcription start site region 1643
4930553I04Rik 5 128735360 to 128736029 669 - unclassified gene RIKEN cDNA 4930553I04 gene
Cpgi16665 5 128735848 to 128736402 554 CpG island CpG island 16665
Tssr53471 5 128736011 to 128736018 7 - TSS region transcription start site region 53471
Piwil1 5 128736070 to 128755474 19404 + protein coding gene piwi-like RNA-mediated gene silencing 1
Tssr48983 5 128736086 to 128736093 7 + TSS region transcription start site region 48983
Tssr48984 5 128736125 to 128736132 7 + TSS region transcription start site region 48984
Tssr1644 5 128736160 to 128736161 1 + TSS region transcription start site region 1644
Tssr48985 5 128736168 to 128736187 19 + TSS region transcription start site region 48985
Tssr48986 5 128736242 to 128736247 5 + TSS region transcription start site region 48986