Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:127350703-128460718

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem132c 5 127241826 to 127565790 323964 + protein coding gene transmembrane protein 132C
Tssr48964 5 127406659 to 127406661 2 + TSS region transcription start site region 48964
Tssr48965 5 127554721 to 127554732 11 + TSS region transcription start site region 48965
Tssr48966 5 127564295 to 127564299 4 + TSS region transcription start site region 48966
Gm42980 5 127578750 to 127580109 1359 + lincRNA gene predicted gene 42980
Slc15a4 5 127595664 to 127632897 37233 - protein coding gene solute carrier family 15, member 4
Tssr48967 5 127615700 to 127615718 18 + TSS region transcription start site region 48967
Tssr48968 5 127615810 to 127615822 12 + TSS region transcription start site region 48968
Cpgi16654 5 127616158 to 127617701 1543 CpG island CpG island 16654
Gm43474 5 127616992 to 127617765 773 + unclassified gene predicted gene 43474
Tssr53463 5 127617343 to 127617354 11 - TSS region transcription start site region 53463
Tssr53464 5 127617372 to 127617426 54 - TSS region transcription start site region 53464
Tssr48969 5 127632057 to 127632075 18 + TSS region transcription start site region 48969
Glt1d1 5 127632130 to 127708750 76620 + protein coding gene glycosyltransferase 1 domain containing 1
Cpgi16655 5 127632168 to 127633002 834 CpG island CpG island 16655
Tssr48970 5 127632238 to 127632271 33 + TSS region transcription start site region 48970
Tssr53465 5 127632915 to 127632946 31 - TSS region transcription start site region 53465
Tssr53466 5 127633260 to 127633263 3 - TSS region transcription start site region 53466
Tssr48971 5 127657495 to 127657500 5 + TSS region transcription start site region 48971
D5Mit215 5 127674588 to 127674706 118 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 215
D5Dcr11 5 127674601 to 127674696 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 11
D5Mit383 5 127680178 to 127680281 103 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology-383
Tssr48972 5 127700619 to 127700630 11 + TSS region transcription start site region 48972
D5Mit59 5 127717541 to 127717662 121 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 59
Cpgi16656 5 127741383 to 127741570 187 CpG island CpG island 16656
Tssr53467 5 127783160 to 127783189 29 - TSS region transcription start site region 53467
Tmem132d 5 127783491 to 128433077 649586 - protein coding gene transmembrane protein 132D
Tssr48973 5 127793284 to 127793285 1 + TSS region transcription start site region 48973
Gm17132 5 127877333 to 127878490 1157 + pseudogene predicted gene 17132
Gm17131 5 127878531 to 127882376 3845 + pseudogene predicted gene 17131
Tssr48974 5 127896241 to 127896248 7 + TSS region transcription start site region 48974
Tssr48975 5 127905703 to 127905718 15 + TSS region transcription start site region 48975
D5Mit371 5 128081070 to 128081187 117 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 371
D5Mit217 5 128095566 to 128095757 191 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 217
Gm42497 5 128239382 to 128241339 1957 - unclassified gene predicted gene 42497
Cpgi16657 5 128268669 to 128269284 615 CpG island CpG island 16657
Gm42496 5 128295628 to 128298868 3240 - unclassified gene predicted gene 42496
Gm42817 5 128336777 to 128342778 6001 + antisense lncRNA gene predicted gene 42817
Cpgi16658 5 128432005 to 128433428 1423 CpG island CpG island 16658
Tssr53468 5 128433066 to 128433095 29 - TSS region transcription start site region 53468
Gm33738 5 128443488 to 128449804 6316 + lncRNA gene predicted gene, 33738
Tssr48976 5 128443551 to 128443560 9 + TSS region transcription start site region 48976
D5Mit244 5 128443690 to 128443828 138 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 244
Cpgi16659 5 128444298 to 128444640 342 CpG island CpG island 16659
Tssr1641 5 128444337 to 128444346 9 + TSS region transcription start site region 1641
Gm42495 5 128444416 to 128447731 3315 + lincRNA gene predicted gene 42495
Gm42500 5 128448904 to 128449782 878 + lincRNA gene predicted gene 42500