Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:127191826-127615790

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43476 5 127200693 to 127201097 404 - lincRNA gene predicted gene 43476
4930548G05Rik 5 127202362 to 127230534 28172 - lncRNA gene RIKEN cDNA 4930548G05 gene
Cpgi16652 5 127241267 to 127243319 2052 CpG island CpG island 16652
Tssr48959 5 127241785 to 127241798 13 + TSS region transcription start site region 48959
Tssr48960 5 127241807 to 127241849 42 + TSS region transcription start site region 48960
Tmem132c 5 127241826 to 127565790 323964 + protein coding gene transmembrane protein 132C
Cpgi16653 5 127243321 to 127243820 499 CpG island CpG island 16653
Tssr48961 5 127245146 to 127245153 7 + TSS region transcription start site region 48961
Tmem132cos 5 127256860 to 127281623 24763 - antisense lncRNA gene transmembrane protein 132C, opposite strand
Tssr48962 5 127257164 to 127257166 2 + TSS region transcription start site region 48962
Tssr53461 5 127281572 to 127281608 36 - TSS region transcription start site region 53461
Tssr53462 5 127281620 to 127281627 7 - TSS region transcription start site region 53462
D5Mit212 5 127299938 to 127300059 121 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 212
Tssr48963 5 127302607 to 127302611 4 + TSS region transcription start site region 48963
9430087B13Rik 5 127309017 to 127310101 1084 + unclassified gene RIKEN cDNA 9430087B13 gene
Tssr48964 5 127406659 to 127406661 2 + TSS region transcription start site region 48964
Tssr48965 5 127554721 to 127554732 11 + TSS region transcription start site region 48965
Tssr48966 5 127564295 to 127564299 4 + TSS region transcription start site region 48966
Gm42980 5 127578750 to 127580109 1359 + lincRNA gene predicted gene 42980
Slc15a4 5 127595664 to 127632897 37233 - protein coding gene solute carrier family 15, member 4
Tssr48967 5 127615700 to 127615718 18 + TSS region transcription start site region 48967