MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:126788890-127059008

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vng	5	104239005 to 126924008	22685003		heritable phenotypic marker	van gogh
Hmtb4	5	108614643 to 126805880	18191237		QTL	hemostasis and thrombosis rebleeding time 4
Gm42953	5	126797255 to 126815482	18227	-	lincRNA gene	predicted gene 42953
D5Mit320	5	126805757 to 126805880	123		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 320
Hmtb5	5	126805880 to 99801563	-27004317		QTL	hemostasis and thrombosis bleeding time 5
Gm40331	5	126852757 to 126885316	32559	+	lincRNA gene	predicted gene, 40331
D5Mit174	5	126890472 to 126890611	139		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 174
D5Mit161	5	126923890 to 126924008	118		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 161
Tmc1m4	5	126924008 to 54342835	-72581173		QTL	Tmc1 modifier 4
D5Mit140	5	126948601 to 126948719	118		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 140
Gm42955	5	127020227 to 127023619	3392	+	unclassified gene	predicted gene 42955
Tssr48953	5	127027372 to 127027379	7	+	TSS region	transcription start site region 48953
Tssr48954	5	127027381 to 127027388	7	+	TSS region	transcription start site region 48954
Tssr48955	5	127027389 to 127027399	10	+	TSS region	transcription start site region 48955
4933438B17Rik	5	127030789 to 127088529	57740	+	lincRNA gene	RIKEN cDNA 4933438B17 gene
Tssr48956	5	127030806 to 127030821	15	+	TSS region	transcription start site region 48956
Tssr48957	5	127030823 to 127030834	11	+	TSS region	transcription start site region 48957