Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:126673890-127174008

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vng 5 104239005 to 126924008 22685003 heritable phenotypic marker van gogh
Hmtb4 5 108614643 to 126805880 18191237 QTL hemostasis and thrombosis rebleeding time 4
Gm33239 5 126694279 to 126706598 12319 + lncRNA gene predicted gene, 33239
1700081B01Rik 5 126706914 to 126736252 29338 + lincRNA gene RIKEN cDNA 1700081B01 gene
Gm33347 5 126724326 to 126727284 2958 - lincRNA gene predicted gene, 33347
Tssr53460 5 126727275 to 126727300 25 - TSS region transcription start site region 53460
D5Mit189 5 126730335 to 126730479 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 189
D5Mit370 5 126786591 to 126786711 120 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 370
Gm42953 5 126797255 to 126815482 18227 - lincRNA gene predicted gene 42953
D5Mit320 5 126805757 to 126805880 123 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 320
Hmtb5 5 126805880 to 99801563 -27004317 QTL hemostasis and thrombosis bleeding time 5
Gm40331 5 126852757 to 126885316 32559 + lincRNA gene predicted gene, 40331
D5Mit174 5 126890472 to 126890611 139 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 174
D5Mit161 5 126923890 to 126924008 118 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 161
Tmc1m4 5 126924008 to 54342835 -72581173 QTL Tmc1 modifier 4
D5Mit140 5 126948601 to 126948719 118 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 140
Gm42955 5 127020227 to 127023619 3392 + unclassified gene predicted gene 42955
Tssr48953 5 127027372 to 127027379 7 + TSS region transcription start site region 48953
Tssr48954 5 127027381 to 127027388 7 + TSS region transcription start site region 48954
Tssr48955 5 127027389 to 127027399 10 + TSS region transcription start site region 48955
4933438B17Rik 5 127030789 to 127088529 57740 + lincRNA gene RIKEN cDNA 4933438B17 gene
Tssr48956 5 127030806 to 127030821 15 + TSS region transcription start site region 48956
Tssr48957 5 127030823 to 127030834 11 + TSS region transcription start site region 48957
Gm33491 5 127070093 to 127107436 37343 - lncRNA gene predicted gene, 33491
Gm43475 5 127108069 to 127108856 787 + lincRNA gene predicted gene 43475
D5Ertd159e 5 127113266 to 127113493 227 DNA segment DNA segment, Chr 5, ERATO Doi 159, expressed
D5Mit289 5 127168862 to 127169207 345 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 289
Tssr48958 5 127170549 to 127170579 30 + TSS region transcription start site region 48958
4930572K03Rik 5 127170565 to 127184356 13791 + lincRNA gene RIKEN cDNA 4930572K03 gene