Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:125477418-125847583

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aacs 5 125475873 to 125517403 41530 + protein coding gene acetoacetyl-CoA synthetase
Gm27551 5 125479377 to 125479453 76 + miRNA gene predicted gene, 27551
Tssr48943 5 125495975 to 125495996 21 + TSS region transcription start site region 48943
Tssr48944 5 125496052 to 125496056 4 + TSS region transcription start site region 48944
Cpgi16648 5 125531593 to 125533440 1847 CpG island CpG island 16648
Tssr48945 5 125531787 to 125531819 32 + TSS region transcription start site region 48945
Tssr48946 5 125532377 to 125532393 16 + TSS region transcription start site region 48946
Tssr48947 5 125532403 to 125532419 16 + TSS region transcription start site region 48947
Tmem132b 5 125532418 to 125792583 260165 + protein coding gene transmembrane protein 132B
Tssr1639 5 125532531 to 125532538 7 + TSS region transcription start site region 1639
Tssr48948 5 125532541 to 125532544 3 + TSS region transcription start site region 48948
Cpgi16649 5 125534591 to 125534844 253 CpG island CpG island 16649
Tssr48949 5 125555437 to 125555439 2 + TSS region transcription start site region 48949
Tssr53455 5 125589030 to 125589039 9 - TSS region transcription start site region 53455
Gm32811 5 125761766 to 125767311 5545 - lncRNA gene predicted gene, 32811
Tssr1640 5 125766433 to 125766447 14 - TSS region transcription start site region 1640
Gm40327 5 125816735 to 125838104 21369 - lncRNA gene predicted gene, 40327