Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:125432418-125892583

43 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
oar	5	119880432 to 125451502	5571070		heritable phenotypic marker	oarleg
Dhx37	5	125413858 to 125434121	20263	-	protein coding gene	DEAH (Asp-Glu-Ala-His) box polypeptide 37
Cpgi16644	5	125433587 to 125434326	739		CpG island	CpG island 16644
Tssr53454	5	125434053 to 125434131	78	-	TSS region	transcription start site region 53454
Gm43752	5	125435075 to 125435771	696	+	pseudogene	predicted gene 43752
Cpgi16645	5	125441273 to 125442351	1078		CpG island	CpG island 16645
Tssr48935	5	125441546 to 125441614	68	+	TSS region	transcription start site region 48935
Bri3bp	5	125441568 to 125460370	18802	+	protein coding gene	Bri3 binding protein
Tssr48936	5	125441618 to 125441667	49	+	TSS region	transcription start site region 48936
Tssr48937	5	125441673 to 125441674	1	+	TSS region	transcription start site region 48937
Tssr48938	5	125442111 to 125442123	12	+	TSS region	transcription start site region 48938
D5Mit139	5	125451321 to 125451502	181		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 139
Tssr48939	5	125454354 to 125454416	62	+	TSS region	transcription start site region 48939
Gm40325	5	125464566 to 125466926	2360	+	lncRNA gene	predicted gene, 40325
Cpgi16646	5	125465678 to 125466049	371		CpG island	CpG island 16646
Tssr48940	5	125465995 to 125466038	43	+	TSS region	transcription start site region 48940
Gm43756	5	125471497 to 125474334	2837	+	unclassified gene	predicted gene 43756
Cpgi16647	5	125475467 to 125476610	1143		CpG island	CpG island 16647
Tssr48941	5	125475826 to 125475860	34	+	TSS region	transcription start site region 48941
Tssr48942	5	125475864 to 125475889	25	+	TSS region	transcription start site region 48942
Aacs	5	125475873 to 125517403	41530	+	protein coding gene	acetoacetyl-CoA synthetase
Gm27551	5	125479377 to 125479453	76	+	miRNA gene	predicted gene, 27551
Tssr48943	5	125495975 to 125495996	21	+	TSS region	transcription start site region 48943
Tssr48944	5	125496052 to 125496056	4	+	TSS region	transcription start site region 48944
Cpgi16648	5	125531593 to 125533440	1847		CpG island	CpG island 16648
Tssr48945	5	125531787 to 125531819	32	+	TSS region	transcription start site region 48945
Tssr48946	5	125532377 to 125532393	16	+	TSS region	transcription start site region 48946
Tssr48947	5	125532403 to 125532419	16	+	TSS region	transcription start site region 48947
Tmem132b	5	125532418 to 125792583	260165	+	protein coding gene	transmembrane protein 132B
Tssr1639	5	125532531 to 125532538	7	+	TSS region	transcription start site region 1639
Tssr48948	5	125532541 to 125532544	3	+	TSS region	transcription start site region 48948
Cpgi16649	5	125534591 to 125534844	253		CpG island	CpG island 16649
Tssr48949	5	125555437 to 125555439	2	+	TSS region	transcription start site region 48949
Tssr53455	5	125589030 to 125589039	9	-	TSS region	transcription start site region 53455
Gm32811	5	125761766 to 125767311	5545	-	lncRNA gene	predicted gene, 32811
Tssr1640	5	125766433 to 125766447	14	-	TSS region	transcription start site region 1640
Gm40327	5	125816735 to 125838104	21369	-	lncRNA gene	predicted gene, 40327
Gm4868	5	125847952 to 125848740	788	-	pseudogene	predicted gene 4868
Tssr53456	5	125849882 to 125849893	11	-	TSS region	transcription start site region 53456
Tssr53457	5	125849897 to 125849904	7	-	TSS region	transcription start site region 53457
Tssr48950	5	125850002 to 125850008	6	+	TSS region	transcription start site region 48950
Tssr48951	5	125850012 to 125850031	19	+	TSS region	transcription start site region 48951
Gm40328	5	125860001 to 125861873	1872	-	lncRNA gene	predicted gene, 40328