Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 5:125432418-125892583

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44 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
oar 5 119880432 to 125451502 5571070 heritable phenotypic marker oarleg
Dhx37 5 125413858 to 125434121 20263 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 37
Cpgi16644 5 125433587 to 125434326 739 CpG island CpG island 16644
Tssr53454 5 125434053 to 125434131 78 - TSS region transcription start site region 53454
Gm43752 5 125435075 to 125435771 696 + pseudogene predicted gene 43752
Cpgi16645 5 125441273 to 125442351 1078 CpG island CpG island 16645
Tssr48935 5 125441546 to 125441614 68 + TSS region transcription start site region 48935
Bri3bp 5 125441568 to 125460370 18802 + protein coding gene Bri3 binding protein
Tssr48936 5 125441618 to 125441667 49 + TSS region transcription start site region 48936
Tssr48937 5 125441673 to 125441674 1 + TSS region transcription start site region 48937
Tssr48938 5 125442111 to 125442123 12 + TSS region transcription start site region 48938
D5Mit139 5 125451321 to 125451502 181 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 139
Tssr48939 5 125454354 to 125454416 62 + TSS region transcription start site region 48939
Gm40325 5 125464566 to 125466926 2360 + lncRNA gene predicted gene, 40325
Cpgi16646 5 125465678 to 125466049 371 CpG island CpG island 16646
Tssr48940 5 125465995 to 125466038 43 + TSS region transcription start site region 48940
Gm43756 5 125471497 to 125474334 2837 + unclassified gene predicted gene 43756
Cpgi16647 5 125475467 to 125476610 1143 CpG island CpG island 16647
Tssr48941 5 125475826 to 125475860 34 + TSS region transcription start site region 48941
Tssr48942 5 125475864 to 125475889 25 + TSS region transcription start site region 48942
Aacs 5 125475873 to 125517405 41532 + protein coding gene acetoacetyl-CoA synthetase
Gm27551 5 125479377 to 125479453 76 + miRNA gene predicted gene, 27551
Tssr48943 5 125495975 to 125495996 21 + TSS region transcription start site region 48943
Tssr48944 5 125496052 to 125496056 4 + TSS region transcription start site region 48944
Cpgi16648 5 125531593 to 125533440 1847 CpG island CpG island 16648
Tssr48945 5 125531787 to 125531819 32 + TSS region transcription start site region 48945
Tssr48946 5 125532377 to 125532393 16 + TSS region transcription start site region 48946
Tssr48947 5 125532403 to 125532419 16 + TSS region transcription start site region 48947
Tmem132b 5 125532418 to 125792583 260165 + protein coding gene transmembrane protein 132B
Tssr1639 5 125532531 to 125532538 7 + TSS region transcription start site region 1639
Tssr48948 5 125532541 to 125532544 3 + TSS region transcription start site region 48948
Cpgi16649 5 125534591 to 125534844 253 CpG island CpG island 16649
Tssr48949 5 125555437 to 125555439 2 + TSS region transcription start site region 48949
Tssr53455 5 125589030 to 125589039 9 - TSS region transcription start site region 53455
Gm32811 5 125762042 to 125763909 1867 - lncRNA gene predicted gene, 32811
Tssr1640 5 125766433 to 125766447 14 - TSS region transcription start site region 1640
Gm51294 5 125781683 to 125781738 55 + miRNA gene predicted gene, 51294
Gm40327 5 125816777 to 125837905 21128 - lncRNA gene predicted gene, 40327
Gm4868 5 125847952 to 125848740 788 - pseudogene predicted gene 4868
Tssr53456 5 125849882 to 125849893 11 - TSS region transcription start site region 53456
Tssr53457 5 125849897 to 125849904 7 - TSS region transcription start site region 53457
Tssr48950 5 125850002 to 125850008 6 + TSS region transcription start site region 48950
Tssr48951 5 125850012 to 125850031 19 + TSS region transcription start site region 48951
Gm40328 5 125860059 to 125861815 1756 - lncRNA gene predicted gene, 40328