Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:125392776-125412932

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr53448	5	125392946 to 125392955	9	-	TSS region	transcription start site region 53448
Tssr53449	5	125392958 to 125392975	17	-	TSS region	transcription start site region 53449
Tssr53450	5	125392995 to 125393015	20	-	TSS region	transcription start site region 53450
Tssr53451	5	125393050 to 125393066	16	-	TSS region	transcription start site region 53451
Tssr53452	5	125393313 to 125393321	8	-	TSS region	transcription start site region 53452
Tssr53453	5	125393325 to 125393339	14	-	TSS region	transcription start site region 53453
Tssr48933	5	125393430 to 125393454	24	+	TSS region	transcription start site region 48933
Tssr48934	5	125394433 to 125394449	16	+	TSS region	transcription start site region 48934
Cpgi16642	5	125402776 to 125402932	156		CpG island	CpG island 16642
n-TAtgc10	5	125404250 to 125404321	71	-	tRNA gene	nuclear encoded tRNA alanine 10 (anticodon TGC)
Cpgi16643	5	125405152 to 125405519	367		CpG island	CpG island 16643
n-TDgtc15	5	125405607 to 125405678	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 15 (anticodon GTC)
n-TFgaa7	5	125406055 to 125406127	72	-	tRNA gene	nuclear encoded tRNA pheylalanine 7 (anticodon GAA)
n-TDgtc14	5	125409016 to 125409087	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 14 (anticodon GTC)
n-TAtgc5	5	125409472 to 125409543	71	+	tRNA gene	nuclear encoded tRNA alanine 5 (anticodon TGC)