Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:125391055-125421127

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr53445 5 125391681 to 125391718 37 - TSS region transcription start site region 53445
Tssr53446 5 125391731 to 125391750 19 - TSS region transcription start site region 53446
Tssr48932 5 125391846 to 125391878 32 + TSS region transcription start site region 48932
Tssr53447 5 125392258 to 125392275 17 - TSS region transcription start site region 53447
Tssr53448 5 125392946 to 125392955 9 - TSS region transcription start site region 53448
Tssr53449 5 125392958 to 125392975 17 - TSS region transcription start site region 53449
Tssr53450 5 125392995 to 125393015 20 - TSS region transcription start site region 53450
Tssr53451 5 125393050 to 125393066 16 - TSS region transcription start site region 53451
Tssr53452 5 125393313 to 125393321 8 - TSS region transcription start site region 53452
Tssr53453 5 125393325 to 125393339 14 - TSS region transcription start site region 53453
Tssr48933 5 125393430 to 125393454 24 + TSS region transcription start site region 48933
Tssr48934 5 125394433 to 125394449 16 + TSS region transcription start site region 48934
Cpgi16642 5 125402776 to 125402932 156 CpG island CpG island 16642
n-TAtgc10 5 125404250 to 125404321 71 - tRNA gene nuclear encoded tRNA alanine 10 (anticodon TGC)
Cpgi16643 5 125405152 to 125405519 367 CpG island CpG island 16643
n-TDgtc15 5 125405607 to 125405678 71 - tRNA gene nuclear encoded tRNA aspartic acid 15 (anticodon GTC)
n-TFgaa7 5 125406055 to 125406127 72 - tRNA gene nuclear encoded tRNA pheylalanine 7 (anticodon GAA)
n-TDgtc14 5 125409016 to 125409087 71 - tRNA gene nuclear encoded tRNA aspartic acid 14 (anticodon GTC)
n-TAtgc5 5 125409472 to 125409543 71 + tRNA gene nuclear encoded tRNA alanine 5 (anticodon TGC)
Dhx37 5 125413858 to 125434121 20263 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 37