Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
oar | 5 | 5571070 | heritable phenotypic marker | oarleg | ||
Atp6v0a2 | 5 | 95403 | + | protein coding gene | ATPase, H+ transporting, lysosomal V0 subunit A2 | |
Gm24854 | 5 | 97 | - | snRNA gene | predicted gene, 24854 | |
4930404A12Rik | 5 | 3082 | - | antisense lncRNA gene | RIKEN cDNA 4930404A12 gene | |
Cpgi16622 | 5 | 569 | CpG island | CpG island 16622 | ||
Dnah10 | 5 | 109223 | + | protein coding gene | dynein, axonemal, heavy chain 10 | |
Tssr48913 | 5 | 18 | + | TSS region | transcription start site region 48913 | |
Tssr48914 | 5 | 3 | + | TSS region | transcription start site region 48914 | |
Gm43777 | 5 | 511 | - | antisense lncRNA gene | predicted gene 43777 | |
Ahl20 | 5 | 113 | QTL | age related hearing loss, early onset 20 | ||
Chlq11 | 5 | 113 | QTL | circulating hormone level QTL 11 | ||
D5Mit95 | 5 | 113 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 95 | ||
Trigq4 | 5 | 113 | QTL | triglyceride QTL 4 | ||
Ccdc92 | 5 | 27789 | - | protein coding gene | coiled-coil domain containing 92 | |
Cpgi16623 | 5 | 498 | CpG island | CpG island 16623 | ||
Cpgi16624 | 5 | 2395 | CpG island | CpG island 16624 | ||
Tssr53378 | 5 | 8 | - | TSS region | transcription start site region 53378 | |
Tssr53379 | 5 | 8 | - | TSS region | transcription start site region 53379 | |
Tssr53380 | 5 | 59 | - | TSS region | transcription start site region 53380 | |
Tssr53381 | 5 | 11 | - | TSS region | transcription start site region 53381 | |
Tssr53382 | 5 | 7 | - | TSS region | transcription start site region 53382 | |
Tssr53383 | 5 | 11 | - | TSS region | transcription start site region 53383 | |
Tssr53384 | 5 | 19 | - | TSS region | transcription start site region 53384 | |
Tssr53385 | 5 | 44 | - | TSS region | transcription start site region 53385 | |
Tssr48915 | 5 | 34 | + | TSS region | transcription start site region 48915 | |
Tssr53386 | 5 | 11 | - | TSS region | transcription start site region 53386 | |
Tssr53387 | 5 | 11 | - | TSS region | transcription start site region 53387 | |
Tssr53388 | 5 | 16 | - | TSS region | transcription start site region 53388 | |
Tssr53389 | 5 | 5 | - | TSS region | transcription start site region 53389 | |
Tssr53390 | 5 | 42 | - | TSS region | transcription start site region 53390 | |
Tssr53391 | 5 | 17 | - | TSS region | transcription start site region 53391 | |
Tssr53392 | 5 | 16 | - | TSS region | transcription start site region 53392 | |
Tssr48916 | 5 | 97 | + | TSS region | transcription start site region 48916 | |
Zfp664 | 5 | 25925 | + | protein coding gene | zinc finger protein 664 | |
Gm32449 | 5 | 3522 | - | lncRNA gene | predicted gene, 32449 | |
Gm40320 | 5 | 5975 | + | lncRNA gene | predicted gene, 40320 | |
Gm40321 | 5 | 23666 | - | lncRNA gene | predicted gene, 40321 | |
Gm32529 | 5 | 1472 | + | lncRNA gene | predicted gene, 32529 | |
Cpgi16625 | 5 | 501 | CpG island | CpG island 16625 | ||
Tssr48917 | 5 | 26 | + | TSS region | transcription start site region 48917 | |
Rflna | 5 | 9072 | + | protein coding gene | refilin A | |
Ncor2 | 5 | 162066 | - | protein coding gene | nuclear receptor co-repressor 2 | |
Cpgi16626 | 5 | 187 | CpG island | CpG island 16626 | ||
Tssr53393 | 5 | 48 | - | TSS region | transcription start site region 53393 | |
Tssr53394 | 5 | 24 | - | TSS region | transcription start site region 53394 | |
Tssr53395 | 5 | 3 | - | TSS region | transcription start site region 53395 | |
Tssr53396 | 5 | 9 | - | TSS region | transcription start site region 53396 | |
Gm42838 | 5 | 529 | + | antisense lncRNA gene | predicted gene 42838 | |
Cpgi16627 | 5 | 767 | CpG island | CpG island 16627 | ||
Tssr53397 | 5 | 12 | - | TSS region | transcription start site region 53397 | |
Tssr53398 | 5 | 44 | - | TSS region | transcription start site region 53398 | |
Tssr53399 | 5 | 5 | - | TSS region | transcription start site region 53399 | |
Cpgi16628 | 5 | 184 | CpG island | CpG island 16628 | ||
Tssr48918 | 5 | 7 | + | TSS region | transcription start site region 48918 | |
Tssr53400 | 5 | 44 | - | TSS region | transcription start site region 53400 | |
D5Ertd470e | 5 | 201 | DNA segment | DNA segment, Chr 5, ERATO Doi 470, expressed | ||
Gm42839 | 5 | 3518 | + | antisense lncRNA gene | predicted gene 42839 | |
D5Mit138 | 5 | 146 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 138 | ||
Elmaz2 | 5 | 16613546 | QTL | elevated maze behavior 2 | ||
Tssr53401 | 5 | 11 | - | TSS region | transcription start site region 53401 | |
Cpgi16629 | 5 | 451 | CpG island | CpG island 16629 | ||
Tssr53402 | 5 | 31 | - | TSS region | transcription start site region 53402 | |
Tssr53403 | 5 | 37 | - | TSS region | transcription start site region 53403 | |
Tssr53404 | 5 | 32 | - | TSS region | transcription start site region 53404 | |
Tssr53405 | 5 | 16 | - | TSS region | transcription start site region 53405 | |
Cpgi16630 | 5 | 257 | CpG island | CpG island 16630 | ||
Cpgi16631 | 5 | 322 | CpG island | CpG island 16631 | ||
Tssr53406 | 5 | 20 | - | TSS region | transcription start site region 53406 | |
Tssr53407 | 5 | 27 | - | TSS region | transcription start site region 53407 | |
Tssr53408 | 5 | 86 | - | TSS region | transcription start site region 53408 | |
Tssr53409 | 5 | 21 | - | TSS region | transcription start site region 53409 | |
Tssr53410 | 5 | 22 | - | TSS region | transcription start site region 53410 | |
Tssr48919 | 5 | 6 | + | TSS region | transcription start site region 48919 | |
Cpgi16633 | 5 | 244 | CpG island | CpG island 16633 | ||
Cpgi16634 | 5 | 2374 | CpG island | CpG island 16634 | ||
Tssr53411 | 5 | 7 | - | TSS region | transcription start site region 53411 | |
Tssr53412 | 5 | 74 | - | TSS region | transcription start site region 53412 | |
Cpgi16635 | 5 | 438 | CpG island | CpG island 16635 | ||
Gm32585 | 5 | 14093 | - | lincRNA gene | predicted gene, 32585 | |
D5Mit173.1 | 5 | 142 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 173.1 | ||
D5Mit173 | 5 | 171 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 173 | ||
Cpgi16636 | 5 | 516 | CpG island | CpG island 16636 | ||
Tssr53413 | 5 | 15 | - | TSS region | transcription start site region 53413 | |
Tssr53414 | 5 | 9 | - | TSS region | transcription start site region 53414 | |
Tssr53415 | 5 | 11 | - | TSS region | transcription start site region 53415 | |
Tssr53416 | 5 | 11 | - | TSS region | transcription start site region 53416 | |
Tssr48920 | 5 | 3 | + | TSS region | transcription start site region 48920 | |
Tssr1636 | 5 | 1 | + | TSS region | transcription start site region 1636 | |
Cpgi16637 | 5 | 193 | CpG island | CpG island 16637 | ||
Scarb1 | 5 | 64007 | - | protein coding gene | scavenger receptor class B, member 1 | |
Tssr53417 | 5 | 9 | - | TSS region | transcription start site region 53417 | |
Tssr53418 | 5 | 16 | - | TSS region | transcription start site region 53418 | |
Tssr53419 | 5 | 30 | - | TSS region | transcription start site region 53419 | |
Cpgi16638 | 5 | 372 | CpG island | CpG island 16638 | ||
Tssr53420 | 5 | 17 | - | TSS region | transcription start site region 53420 | |
Tssr53421 | 5 | 9 | - | TSS region | transcription start site region 53421 | |
Tssr53422 | 5 | 36 | - | TSS region | transcription start site region 53422 | |
Tssr48921 | 5 | 6 | + | TSS region | transcription start site region 48921 | |
Tssr53423 | 5 | 18 | - | TSS region | transcription start site region 53423 | |
Tssr53424 | 5 | 29 | - | TSS region | transcription start site region 53424 | |
Tssr53425 | 5 | 39 | - | TSS region | transcription start site region 53425 | |
Tssr48922 | 5 | 18 | + | TSS region | transcription start site region 48922 | |
Tssr53426 | 5 | 12 | - | TSS region | transcription start site region 53426 | |
Tssr53427 | 5 | 10 | - | TSS region | transcription start site region 53427 | |
Tssr53428 | 5 | 27 | - | TSS region | transcription start site region 53428 | |
Gm32701 | 5 | 9356 | + | lncRNA gene | predicted gene, 32701 | |
Tssr48923 | 5 | 11 | + | TSS region | transcription start site region 48923 | |
Tssr1637 | 5 | 17 | + | TSS region | transcription start site region 1637 | |
Tssr53429 | 5 | 28 | - | TSS region | transcription start site region 53429 | |
Cpgi16639 | 5 | 345 | CpG island | CpG island 16639 | ||
Tssr53430 | 5 | 9 | - | TSS region | transcription start site region 53430 | |
Tssr48924 | 5 | 11 | + | TSS region | transcription start site region 48924 | |
Tssr53431 | 5 | 8 | - | TSS region | transcription start site region 53431 | |
Gm42633 | 5 | 2763 | - | unclassified gene | predicted gene 42633 | |
Tssr53432 | 5 | 50 | - | TSS region | transcription start site region 53432 | |
Tssr53433 | 5 | 49 | - | TSS region | transcription start site region 53433 | |
Cpgi16640 | 5 | 1167 | CpG island | CpG island 16640 | ||
Tssr53434 | 5 | 16 | - | TSS region | transcription start site region 53434 | |
Tssr53435 | 5 | 69 | - | TSS region | transcription start site region 53435 | |
Gm40323 | 5 | 9585 | + | lincRNA gene | predicted gene, 40323 | |
D5Mit426 | 5 | 120 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 426 | ||
Gm40324 | 5 | 4953 | + | lncRNA gene | predicted gene, 40324 | |
Ubc | 5 | 4052 | - | protein coding gene | ubiquitin C | |
Tssr48925 | 5 | 3 | + | TSS region | transcription start site region 48925 | |
Tssr53436 | 5 | 3 | - | TSS region | transcription start site region 53436 | |
Cpgi16641 | 5 | 1203 | CpG island | CpG island 16641 | ||
Tssr53437 | 5 | 20 | - | TSS region | transcription start site region 53437 | |
Tssr53438 | 5 | 31 | - | TSS region | transcription start site region 53438 | |
Tssr53439 | 5 | 7 | - | TSS region | transcription start site region 53439 | |
Tssr48926 | 5 | 5 | + | TSS region | transcription start site region 48926 | |
Tssr48927 | 5 | 43 | + | TSS region | transcription start site region 48927 | |
Gm10382 | 5 | 1232 | + | protein coding gene | predicted gene 10382 | |
Tssr48928 | 5 | 11 | + | TSS region | transcription start site region 48928 | |
Tssr48929 | 5 | 17 | + | TSS region | transcription start site region 48929 | |
Tssr48930 | 5 | 7 | + | TSS region | transcription start site region 48930 | |
Tssr53440 | 5 | 28 | - | TSS region | transcription start site region 53440 | |
Tssr53441 | 5 | 5 | - | TSS region | transcription start site region 53441 | |
Tssr1638 | 5 | 25 | + | TSS region | transcription start site region 1638 | |
Tssr53442 | 5 | 140 | - | TSS region | transcription start site region 53442 | |
Tssr53443 | 5 | 13 | - | TSS region | transcription start site region 53443 | |
Tssr53444 | 5 | 46 | - | TSS region | transcription start site region 53444 | |
Tssr48931 | 5 | 36 | + | TSS region | transcription start site region 48931 | |
Tssr53445 | 5 | 37 | - | TSS region | transcription start site region 53445 | |
Tssr53446 | 5 | 19 | - | TSS region | transcription start site region 53446 | |
Tssr48932 | 5 | 32 | + | TSS region | transcription start site region 48932 | |
Tssr53447 | 5 | 17 | - | TSS region | transcription start site region 53447 | |
Tssr53448 | 5 | 9 | - | TSS region | transcription start site region 53448 | |
Tssr53449 | 5 | 17 | - | TSS region | transcription start site region 53449 | |
Tssr53450 | 5 | 20 | - | TSS region | transcription start site region 53450 | |
Tssr53451 | 5 | 16 | - | TSS region | transcription start site region 53451 | |
Tssr53452 | 5 | 8 | - | TSS region | transcription start site region 53452 | |
Tssr53453 | 5 | 14 | - | TSS region | transcription start site region 53453 | |
Tssr48933 | 5 | 24 | + | TSS region | transcription start site region 48933 | |
Tssr48934 | 5 | 16 | + | TSS region | transcription start site region 48934 | |
Cpgi16642 | 5 | 156 | CpG island | CpG island 16642 | ||
n-TAtgc10 | 5 | 71 | - | tRNA gene | nuclear encoded tRNA alanine 10 (anticodon TGC) | |
Cpgi16643 | 5 | 367 | CpG island | CpG island 16643 | ||
n-TDgtc15 | 5 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 15 (anticodon GTC) | |
n-TFgaa7 | 5 | 72 | - | tRNA gene | nuclear encoded tRNA pheylalanine 7 (anticodon GAA) | |
n-TDgtc14 | 5 | 71 | - | tRNA gene | nuclear encoded tRNA aspartic acid 14 (anticodon GTC) | |
n-TAtgc5 | 5 | 71 | + | tRNA gene | nuclear encoded tRNA alanine 5 (anticodon TGC) | |
Dhx37 | 5 | 20263 | - | protein coding gene | DEAH (Asp-Glu-Ala-His) box polypeptide 37 | |
Cpgi16644 | 5 | 739 | CpG island | CpG island 16644 | ||
Tssr53454 | 5 | 78 | - | TSS region | transcription start site region 53454 | |
Gm43752 | 5 | 696 | + | pseudogene | predicted gene 43752 | |
Cpgi16645 | 5 | 1078 | CpG island | CpG island 16645 | ||
Tssr48935 | 5 | 68 | + | TSS region | transcription start site region 48935 | |
Bri3bp | 5 | 18802 | + | protein coding gene | Bri3 binding protein | |
Tssr48936 | 5 | 49 | + | TSS region | transcription start site region 48936 | |
Tssr48937 | 5 | 1 | + | TSS region | transcription start site region 48937 | |
Tssr48938 | 5 | 12 | + | TSS region | transcription start site region 48938 | |
D5Mit139 | 5 | 181 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 139 | ||
Tssr48939 | 5 | 62 | + | TSS region | transcription start site region 48939 | |
Gm40325 | 5 | 2360 | + | lncRNA gene | predicted gene, 40325 | |
Cpgi16646 | 5 | 371 | CpG island | CpG island 16646 | ||
Tssr48940 | 5 | 43 | + | TSS region | transcription start site region 48940 | |
Gm43756 | 5 | 2837 | + | unclassified gene | predicted gene 43756 | |
Cpgi16647 | 5 | 1143 | CpG island | CpG island 16647 | ||
Tssr48941 | 5 | 34 | + | TSS region | transcription start site region 48941 | |
Tssr48942 | 5 | 25 | + | TSS region | transcription start site region 48942 | |
Aacs | 5 | 41530 | + | protein coding gene | acetoacetyl-CoA synthetase | |
Gm27551 | 5 | 76 | + | miRNA gene | predicted gene, 27551 | |
Tssr48943 | 5 | 21 | + | TSS region | transcription start site region 48943 | |
Tssr48944 | 5 | 4 | + | TSS region | transcription start site region 48944 | |
Cpgi16648 | 5 | 1847 | CpG island | CpG island 16648 | ||
Tssr48945 | 5 | 32 | + | TSS region | transcription start site region 48945 | |
Tssr48946 | 5 | 16 | + | TSS region | transcription start site region 48946 | |
Tssr48947 | 5 | 16 | + | TSS region | transcription start site region 48947 | |
Tmem132b | 5 | 260165 | + | protein coding gene | transmembrane protein 132B | |
Tssr1639 | 5 | 7 | + | TSS region | transcription start site region 1639 | |
Tssr48948 | 5 | 3 | + | TSS region | transcription start site region 48948 | |
Cpgi16649 | 5 | 253 | CpG island | CpG island 16649 |