MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:124579050-124679097

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Eif2b1	5	124570214 to 124579131	8917	-	protein coding gene	eukaryotic translation initiation factor 2B, subunit 1 (alpha)
Cpgi16619	5	124578684 to 124579694	1010		CpG island	CpG island 16619
Tssr53376	5	124579045 to 124579075	30	-	TSS region	transcription start site region 53376
Tssr53377	5	124579083 to 124579095	12	-	TSS region	transcription start site region 53377
Tssr48907	5	124579115 to 124579124	9	+	TSS region	transcription start site region 48907
Tssr48908	5	124579134 to 124579184	50	+	TSS region	transcription start site region 48908
Gtf2h3	5	124579148 to 124597680	18532	+	protein coding gene	general transcription factor IIH, polypeptide 3
Cpgi16620	5	124598555 to 124599290	735		CpG island	CpG island 16620
Tctn2	5	124598749 to 124627738	28989	+	protein coding gene	tectonic family member 2
Tssr48909	5	124598752 to 124598798	46	+	TSS region	transcription start site region 48909
D5Mit279	5	124601675 to 124601797	122		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 279
Cpgi16621	5	124628892 to 124629820	928		CpG island	CpG island 16621
Tssr48910	5	124629050 to 124629097	47	+	TSS region	transcription start site region 48910
Atp6v0a2	5	124629052 to 124724455	95403	+	protein coding gene	ATPase, H+ transporting, lysosomal V0 subunit A2
Tssr48911	5	124629099 to 124629113	14	+	TSS region	transcription start site region 48911
Tssr48912	5	124637488 to 124637501	13	+	TSS region	transcription start site region 48912
Tssr1635	5	124637504 to 124637524	20	+	TSS region	transcription start site region 1635