Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124486308-124576393

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snrnp35 5 124483134 to 124491124 7990 + protein coding gene small nuclear ribonucleoprotein 35 (U11/U12)
Rilpl1 5 124493080 to 124531391 38311 - protein coding gene Rab interacting lysosomal protein-like 1
Tssr53367 5 124496970 to 124497007 37 - TSS region transcription start site region 53367
Tssr48900 5 124497100 to 124497140 40 + TSS region transcription start site region 48900
Tssr48901 5 124522641 to 124522646 5 + TSS region transcription start site region 48901
Gm6046 5 124522643 to 124523121 478 + pseudogene predicted gene 6046
Cpgi16615 5 124530267 to 124531851 1584 CpG island CpG island 16615
Tssr48902 5 124530687 to 124530741 54 + TSS region transcription start site region 48902
Tssr53368 5 124530983 to 124531040 57 - TSS region transcription start site region 53368
Gm43034 5 124531133 to 124532496 1363 + unclassified gene predicted gene 43034
Tssr53369 5 124531194 to 124531232 38 - TSS region transcription start site region 53369
Tssr53370 5 124531291 to 124531307 16 - TSS region transcription start site region 53370
Tssr53371 5 124531308 to 124531393 85 - TSS region transcription start site region 53371
Cpgi16616 5 124536875 to 124537160 285 CpG island CpG island 16616
Cpgi16617 5 124540330 to 124541630 1300 CpG island CpG island 16617
Tssr48903 5 124540743 to 124540786 43 + TSS region transcription start site region 48903
Tmed2 5 124540791 to 124550503 9712 + protein coding gene transmembrane p24 trafficking protein 2
Tssr53372 5 124541081 to 124541095 14 - TSS region transcription start site region 53372
Tssr48904 5 124541296 to 124541315 19 + TSS region transcription start site region 48904
Cpgi16618 5 124552553 to 124553264 711 CpG island CpG island 16618
Tssr53373 5 124552804 to 124552834 30 - TSS region transcription start site region 53373
Tssr48905 5 124552845 to 124552903 58 + TSS region transcription start site region 48905
Ddx55 5 124552864 to 124569660 16796 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Tssr48906 5 124552905 to 124552918 13 + TSS region transcription start site region 48906
Tssr53374 5 124557085 to 124557095 10 - TSS region transcription start site region 53374
Eif2b1 5 124570214 to 124579131 8917 - protein coding gene eukaryotic translation initiation factor 2B, subunit 1 (alpha)