MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:124360072-124440108

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sbno1	5	124368702 to 124425951	57249	-	protein coding gene	strawberry notch 1
Tssr53348	5	124373265 to 124373269	4	-	TSS region	transcription start site region 53348
Tssr53349	5	124392023 to 124392040	17	-	TSS region	transcription start site region 53349
Tssr53350	5	124392605 to 124392644	39	-	TSS region	transcription start site region 53350
Tssr53351	5	124393824 to 124393856	32	-	TSS region	transcription start site region 53351
Tssr53352	5	124396034 to 124396048	14	-	TSS region	transcription start site region 53352
Tssr53353	5	124400072 to 124400108	36	-	TSS region	transcription start site region 53353
Cpgi16609	5	124424607 to 124426282	1675		CpG island	CpG island 16609
Gm37415	5	124424697 to 124426879	2182	+	unclassified gene	predicted gene, 37415
Gm27486	5	124425510 to 124425589	79	-	miRNA gene	predicted gene, 27486
Tssr53354	5	124425548 to 124425566	18	-	TSS region	transcription start site region 53354
Tssr53355	5	124425575 to 124425601	26	-	TSS region	transcription start site region 53355
Tssr53356	5	124425907 to 124425946	39	-	TSS region	transcription start site region 53356
Tssr53357	5	124425949 to 124426001	52	-	TSS region	transcription start site region 53357
Tssr53358	5	124439539 to 124439593	54	-	TSS region	transcription start site region 53358
Cpgi16610	5	124439596 to 124440508	912		CpG island	CpG island 16610
Tssr48860	5	124439891 to 124439991	100	+	TSS region	transcription start site region 48860
Kmt5a	5	124439930 to 124462308	22378	+	protein coding gene	lysine methyltransferase 5A