Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124352023-124432040

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk2ap1 5 124345439 to 124354628 9189 - protein coding gene CDK2 (cyclin-dependent kinase 2)-associated protein 1
Tssr53344 5 124352257 to 124352302 45 - TSS region transcription start site region 53344
Cpgi16607 5 124352646 to 124352821 175 CpG island CpG island 16607
Cpgi16608 5 124353222 to 124354880 1658 CpG island CpG island 16608
Tssr53345 5 124354539 to 124354554 15 - TSS region transcription start site region 53345
Tssr53346 5 124354756 to 124354777 21 - TSS region transcription start site region 53346
Tssr53347 5 124354805 to 124354821 16 - TSS region transcription start site region 53347
Sbno1 5 124368702 to 124425951 57249 - protein coding gene strawberry notch 1
Tssr53348 5 124373265 to 124373269 4 - TSS region transcription start site region 53348
Tssr53349 5 124392023 to 124392040 17 - TSS region transcription start site region 53349
Tssr53350 5 124392605 to 124392644 39 - TSS region transcription start site region 53350
Tssr53351 5 124393824 to 124393856 32 - TSS region transcription start site region 53351
Tssr53352 5 124396034 to 124396048 14 - TSS region transcription start site region 53352
Tssr53353 5 124400072 to 124400108 36 - TSS region transcription start site region 53353
Cpgi16609 5 124424607 to 124426282 1675 CpG island CpG island 16609
Gm37415 5 124424697 to 124426879 2182 + unclassified gene predicted gene, 37415
Gm27486 5 124425510 to 124425589 79 - miRNA gene predicted gene, 27486
Tssr53354 5 124425548 to 124425566 18 - TSS region transcription start site region 53354
Tssr53355 5 124425575 to 124425601 26 - TSS region transcription start site region 53355
Tssr53356 5 124425907 to 124425946 39 - TSS region transcription start site region 53356
Tssr53357 5 124425949 to 124426001 52 - TSS region transcription start site region 53357