Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124218089-124451844

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pitpnm2 5 124118690 to 124249760 131070 - protein coding gene phosphatidylinositol transfer protein, membrane-associated 2
Tssr48853 5 124229722 to 124229734 12 + TSS region transcription start site region 48853
Pitpnm2os1 5 124229725 to 124237137 7412 + antisense lncRNA gene phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 1
Tssr48854 5 124229746 to 124229757 11 + TSS region transcription start site region 48854
Tssr48855 5 124233002 to 124233025 23 + TSS region transcription start site region 48855
Gm42425 5 124237724 to 124238435 711 + antisense lncRNA gene predicted gene 42425
Tssr53329 5 124248078 to 124248126 48 - TSS region transcription start site region 53329
Tssr53330 5 124248373 to 124248399 26 - TSS region transcription start site region 53330
Cpgi16604 5 124248786 to 124250354 1568 CpG island CpG island 16604
Tssr53331 5 124249711 to 124249722 11 - TSS region transcription start site region 53331
Tssr53332 5 124249758 to 124249782 24 - TSS region transcription start site region 53332
Tssr53333 5 124249784 to 124249827 43 - TSS region transcription start site region 53333
Tssr53334 5 124249829 to 124249860 31 - TSS region transcription start site region 53334
Tssr53335 5 124249910 to 124249929 19 - TSS region transcription start site region 53335
Mphosph9 5 124250959 to 124327972 77013 - protein coding gene M-phase phosphoprotein 9
Gm23171 5 124257763 to 124258026 263 + unclassified non-coding RNA gene predicted gene, 23171
Tssr53336 5 124263390 to 124263417 27 - TSS region transcription start site region 53336
Gm43339 5 124278307 to 124279912 1605 - unclassified gene predicted gene 43339
Gm43340 5 124300484 to 124301827 1343 - unclassified gene predicted gene 43340
Cpgi16605 5 124327289 to 124328611 1322 CpG island CpG island 16605
Tssr48856 5 124327631 to 124327642 11 + TSS region transcription start site region 48856
Tssr53337 5 124327812 to 124327879 67 - TSS region transcription start site region 53337
Tssr53338 5 124327883 to 124327894 11 - TSS region transcription start site region 53338
Tssr48857 5 124328083 to 124328094 11 + TSS region transcription start site region 48857
2810006K23Rik 5 124328089 to 124341844 13755 + protein coding gene RIKEN cDNA 2810006K23 gene
Tssr48858 5 124328131 to 124328188 57 + TSS region transcription start site region 48858
Tssr48859 5 124328195 to 124328209 14 + TSS region transcription start site region 48859
Tssr53339 5 124329944 to 124329957 13 - TSS region transcription start site region 53339
Cdk2ap1 5 124345439 to 124354628 9189 - protein coding gene CDK2 (cyclin-dependent kinase 2)-associated protein 1
Cpgi16606 5 124349237 to 124349481 244 CpG island CpG island 16606
Tssr53340 5 124350912 to 124350924 12 - TSS region transcription start site region 53340
Tssr53341 5 124351183 to 124351224 41 - TSS region transcription start site region 53341
Tssr53342 5 124351225 to 124351255 30 - TSS region transcription start site region 53342
Tssr53343 5 124351267 to 124351286 19 - TSS region transcription start site region 53343
Tssr53344 5 124352257 to 124352302 45 - TSS region transcription start site region 53344
Cpgi16607 5 124352646 to 124352821 175 CpG island CpG island 16607
Cpgi16608 5 124353222 to 124354880 1658 CpG island CpG island 16608
Tssr53345 5 124354539 to 124354554 15 - TSS region transcription start site region 53345
Tssr53346 5 124354756 to 124354777 21 - TSS region transcription start site region 53346
Tssr53347 5 124354805 to 124354821 16 - TSS region transcription start site region 53347
Sbno1 5 124368702 to 124425951 57249 - protein coding gene strawberry notch 1
Tssr53348 5 124373265 to 124373269 4 - TSS region transcription start site region 53348
Tssr53349 5 124392023 to 124392040 17 - TSS region transcription start site region 53349
Tssr53350 5 124392605 to 124392644 39 - TSS region transcription start site region 53350
Tssr53351 5 124393824 to 124393856 32 - TSS region transcription start site region 53351
Tssr53352 5 124396034 to 124396048 14 - TSS region transcription start site region 53352
Tssr53353 5 124400072 to 124400108 36 - TSS region transcription start site region 53353
Cpgi16609 5 124424607 to 124426282 1675 CpG island CpG island 16609
Gm37415 5 124424697 to 124426879 2182 + unclassified gene predicted gene, 37415
Gm27486 5 124425510 to 124425589 79 - miRNA gene predicted gene, 27486
Tssr53354 5 124425548 to 124425566 18 - TSS region transcription start site region 53354
Tssr53355 5 124425575 to 124425601 26 - TSS region transcription start site region 53355
Tssr53356 5 124425907 to 124425946 39 - TSS region transcription start site region 53356
Tssr53357 5 124425949 to 124426001 52 - TSS region transcription start site region 53357
Tssr53358 5 124439539 to 124439593 54 - TSS region transcription start site region 53358
Cpgi16610 5 124439596 to 124440508 912 CpG island CpG island 16610
Tssr48860 5 124439891 to 124439991 100 + TSS region transcription start site region 48860
Kmt5a 5 124439930 to 124462308 22378 + protein coding gene lysine methyltransferase 5A
Tssr48861 5 124444468 to 124444471 3 + TSS region transcription start site region 48861
Cpgi16611 5 124444753 to 124446641 1888 CpG island CpG island 16611
Tssr53359 5 124445377 to 124445391 14 - TSS region transcription start site region 53359
Tssr48862 5 124445377 to 124445388 11 + TSS region transcription start site region 48862
Tssr48863 5 124445461 to 124445532 71 + TSS region transcription start site region 48863
Tssr48864 5 124446236 to 124446248 12 + TSS region transcription start site region 48864
Tssr48865 5 124446689 to 124446717 28 + TSS region transcription start site region 48865
Tssr48866 5 124446727 to 124446747 20 + TSS region transcription start site region 48866
Tssr48867 5 124446748 to 124446776 28 + TSS region transcription start site region 48867
Tssr48868 5 124446787 to 124446814 27 + TSS region transcription start site region 48868
Tssr48869 5 124446864 to 124446879 15 + TSS region transcription start site region 48869
Tssr48870 5 124446900 to 124446911 11 + TSS region transcription start site region 48870
Tssr48871 5 124446939 to 124446963 24 + TSS region transcription start site region 48871
Tssr48872 5 124446972 to 124446983 11 + TSS region transcription start site region 48872
Tssr48873 5 124447009 to 124447018 9 + TSS region transcription start site region 48873
Tssr48874 5 124447026 to 124447037 11 + TSS region transcription start site region 48874
Tssr48875 5 124447147 to 124447158 11 + TSS region transcription start site region 48875
Tssr48876 5 124447162 to 124447177 15 + TSS region transcription start site region 48876
Tssr48877 5 124447185 to 124447196 11 + TSS region transcription start site region 48877
Tssr48878 5 124450164 to 124450173 9 + TSS region transcription start site region 48878
Tssr48879 5 124450174 to 124450184 10 + TSS region transcription start site region 48879
Tssr48880 5 124450190 to 124450203 13 + TSS region transcription start site region 48880
Tssr48881 5 124450372 to 124450384 12 + TSS region transcription start site region 48881
Tssr48882 5 124450405 to 124450424 19 + TSS region transcription start site region 48882
Tssr48883 5 124450428 to 124450437 9 + TSS region transcription start site region 48883
Tssr48884 5 124450803 to 124450829 26 + TSS region transcription start site region 48884
Tssr48885 5 124450831 to 124450848 17 + TSS region transcription start site region 48885
Tssr1633 5 124450850 to 124450859 9 + TSS region transcription start site region 1633
Tssr48886 5 124451149 to 124451167 18 + TSS region transcription start site region 48886
Tssr48887 5 124451176 to 124451194 18 + TSS region transcription start site region 48887
Tssr48888 5 124451212 to 124451223 11 + TSS region transcription start site region 48888
Tssr1634 5 124451296 to 124451343 47 + TSS region transcription start site region 1634