Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124102790-124202827

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16001 5 124111109 to 124112264 1155 - lincRNA gene predicted gene 16001
Cpgi16602 5 124111513 to 124112948 1435 CpG island CpG island 16602
Tssr53314 5 124111785 to 124111795 10 - TSS region transcription start site region 53314
Tssr53315 5 124111799 to 124111854 55 - TSS region transcription start site region 53315
Tssr53316 5 124111862 to 124111881 19 - TSS region transcription start site region 53316
Tssr53317 5 124112219 to 124112246 27 - TSS region transcription start site region 53317
Ogfod2 5 124112297 to 124115483 3186 + protein coding gene 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Tssr48844 5 124112298 to 124112351 53 + TSS region transcription start site region 48844
Cpgi16603 5 124115839 to 124116998 1159 CpG island CpG island 16603
Tssr48845 5 124116072 to 124116083 11 + TSS region transcription start site region 48845
Tssr48846 5 124116085 to 124116124 39 + TSS region transcription start site region 48846
Arl6ip4 5 124116108 to 124118195 2087 + protein coding gene ADP-ribosylation factor-like 6 interacting protein 4
Pitpnm2 5 124118690 to 124249760 131070 - protein coding gene phosphatidylinositol transfer protein, membrane-associated 2
Tssr53318 5 124152790 to 124152827 37 - TSS region transcription start site region 53318
Tssr53319 5 124152831 to 124152840 9 - TSS region transcription start site region 53319
Tssr53320 5 124171643 to 124171649 6 - TSS region transcription start site region 53320
Tssr53321 5 124172568 to 124172570 2 - TSS region transcription start site region 53321
Tssr48847 5 124175395 to 124175408 13 + TSS region transcription start site region 48847
Tssr48848 5 124175414 to 124175430 16 + TSS region transcription start site region 48848
Tssr48849 5 124185503 to 124185513 10 + TSS region transcription start site region 48849
Tssr1632 5 124186651 to 124186676 25 + TSS region transcription start site region 1632
Tssr53322 5 124187003 to 124187060 57 - TSS region transcription start site region 53322
Tssr48850 5 124187132 to 124187137 5 + TSS region transcription start site region 48850
Tssr53323 5 124187150 to 124187225 75 - TSS region transcription start site region 53323
Tssr53324 5 124189688 to 124189697 9 - TSS region transcription start site region 53324
Tssr53325 5 124189714 to 124189732 18 - TSS region transcription start site region 53325
Tssr53326 5 124189736 to 124189740 4 - TSS region transcription start site region 53326
Pitpnm2os2 5 124194818 to 124199115 4297 + antisense lncRNA gene phosphatidylinositol transfer protein, membrane-associated 2, opposite strand 2
Tssr48851 5 124194860 to 124194869 9 + TSS region transcription start site region 48851
Tssr48852 5 124194894 to 124194912 18 + TSS region transcription start site region 48852