Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124090839-124141998

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcb9 5 124061857 to 124095967 34110 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 9
Cpgi16601 5 124095161 to 124096139 978 CpG island CpG island 16601
Tssr53312 5 124095734 to 124095745 11 - TSS region transcription start site region 53312
Tssr53313 5 124095749 to 124095820 71 - TSS region transcription start site region 53313
D5Mit369 5 124100052 to 124100176 124 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 369
Skts4 5 124100176 to 89271017 -34829159 QTL skin tumor susceptibility 4
Gm16001 5 124111109 to 124112264 1155 - lincRNA gene predicted gene 16001
Cpgi16602 5 124111513 to 124112948 1435 CpG island CpG island 16602
Tssr53314 5 124111785 to 124111795 10 - TSS region transcription start site region 53314
Tssr53315 5 124111799 to 124111854 55 - TSS region transcription start site region 53315
Tssr53316 5 124111862 to 124111881 19 - TSS region transcription start site region 53316
Tssr53317 5 124112219 to 124112246 27 - TSS region transcription start site region 53317
Ogfod2 5 124112297 to 124115483 3186 + protein coding gene 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Tssr48844 5 124112298 to 124112351 53 + TSS region transcription start site region 48844
Cpgi16603 5 124115839 to 124116998 1159 CpG island CpG island 16603
Tssr48845 5 124116072 to 124116083 11 + TSS region transcription start site region 48845
Tssr48846 5 124116085 to 124116124 39 + TSS region transcription start site region 48846
Arl6ip4 5 124116108 to 124118195 2087 + protein coding gene ADP-ribosylation factor-like 6 interacting protein 4
Pitpnm2 5 124118690 to 124249760 131070 - protein coding gene phosphatidylinositol transfer protein, membrane-associated 2