Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123918609-124058215

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Denr 5 123907269 to 123928832 21563 + protein coding gene density-regulated protein
Gm43518 5 123927418 to 123938388 10970 + protein coding gene predicted gene 43518
Cpgi16595 5 123930390 to 123931093 703 CpG island CpG island 16595
Tssr48823 5 123930665 to 123930674 9 + TSS region transcription start site region 48823
Tssr48824 5 123930675 to 123930718 43 + TSS region transcription start site region 48824
Ccdc62 5 123930679 to 123969895 39216 + protein coding gene coiled-coil domain containing 62
Tssr48825 5 123930723 to 123930754 31 + TSS region transcription start site region 48825
Cpgi16596 5 123973098 to 123974373 1275 CpG island CpG island 16596
Tssr48826 5 123973603 to 123973666 63 + TSS region transcription start site region 48826
Hip1r 5 123973609 to 124003215 29606 + protein coding gene huntingtin interacting protein 1 related
Tssr48827 5 123973675 to 123973697 22 + TSS region transcription start site region 48827
Tssr48828 5 123973717 to 123973733 16 + TSS region transcription start site region 48828
Gm46922 5 123973868 to 123975478 1610 + lncRNA gene predicted gene, 46922
Tssr48829 5 123974419 to 123974423 4 + TSS region transcription start site region 48829
D5Mit160 5 123993857 to 123994000 143 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 160
Mir7032 5 123996852 to 123996930 78 + miRNA gene microRNA 7032
Tssr48830 5 123997362 to 123997374 12 + TSS region transcription start site region 48830
Cpgi16597 5 123997697 to 123998142 445 CpG island CpG island 16597
Tssr48831 5 123998675 to 123998720 45 + TSS region transcription start site region 48831
Vps37b 5 124004641 to 124032260 27619 - protein coding gene vacuolar protein sorting 37B
Gm37939 5 124004648 to 124006151 1503 + unclassified gene predicted gene, 37939
Tssr48832 5 124004988 to 124005008 20 + TSS region transcription start site region 48832
Tssr53284 5 124005617 to 124005648 31 - TSS region transcription start site region 53284
Tssr53285 5 124006115 to 124006154 39 - TSS region transcription start site region 53285
Tssr48833 5 124006467 to 124006490 23 + TSS region transcription start site region 48833
Tssr53286 5 124006471 to 124006494 23 - TSS region transcription start site region 53286
Tssr53287 5 124006551 to 124006569 18 - TSS region transcription start site region 53287
Tssr53288 5 124010712 to 124010718 6 - TSS region transcription start site region 53288
Tssr53289 5 124010790 to 124010803 13 - TSS region transcription start site region 53289
Tssr53290 5 124031018 to 124031022 4 - TSS region transcription start site region 53290
Cpgi16598 5 124031582 to 124032569 987 CpG island CpG island 16598
Tssr53291 5 124032214 to 124032290 76 - TSS region transcription start site region 53291
Gm34086 5 124032358 to 124046037 13679 + lincRNA gene predicted gene, 34086
Tssr48834 5 124032544 to 124032572 28 + TSS region transcription start site region 48834
Tssr53292 5 124034528 to 124034539 11 - TSS region transcription start site region 53292
Tssr53293 5 124034549 to 124034559 10 - TSS region transcription start site region 53293
Tssr53294 5 124034582 to 124034589 7 - TSS region transcription start site region 53294
Tssr53295 5 124034595 to 124034607 12 - TSS region transcription start site region 53295
Tssr53296 5 124034622 to 124034625 3 - TSS region transcription start site region 53296
Tssr48835 5 124034792 to 124034802 10 + TSS region transcription start site region 48835
Gm43661 5 124035201 to 124052352 17151 - lincRNA gene predicted gene 43661
Tssr53297 5 124035689 to 124035714 25 - TSS region transcription start site region 53297
Tssr53298 5 124035735 to 124035752 17 - TSS region transcription start site region 53298
Tssr53299 5 124035768 to 124035773 5 - TSS region transcription start site region 53299
Tssr53300 5 124035790 to 124035802 12 - TSS region transcription start site region 53300
Tssr53301 5 124035807 to 124035815 8 - TSS region transcription start site region 53301
Tssr48836 5 124036257 to 124036261 4 + TSS region transcription start site region 48836
Tssr53302 5 124052046 to 124052074 28 - TSS region transcription start site region 53302
Tssr53303 5 124052213 to 124052227 14 - TSS region transcription start site region 53303