Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123913098-124034373

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Denr 5 123907269 to 123928832 21563 + protein coding gene density-regulated protein
Tssr48821 5 123914986 to 123914992 6 + TSS region transcription start site region 48821
Tssr48822 5 123915093 to 123915107 14 + TSS region transcription start site region 48822
Gm43518 5 123927418 to 123938388 10970 + protein coding gene predicted gene 43518
Cpgi16595 5 123930390 to 123931093 703 CpG island CpG island 16595
Tssr48823 5 123930665 to 123930674 9 + TSS region transcription start site region 48823
Tssr48824 5 123930675 to 123930718 43 + TSS region transcription start site region 48824
Ccdc62 5 123930679 to 123969895 39216 + protein coding gene coiled-coil domain containing 62
Tssr48825 5 123930723 to 123930754 31 + TSS region transcription start site region 48825
Cpgi16596 5 123973098 to 123974373 1275 CpG island CpG island 16596
Tssr48826 5 123973603 to 123973666 63 + TSS region transcription start site region 48826
Hip1r 5 123973609 to 124003215 29606 + protein coding gene huntingtin interacting protein 1 related
Tssr48827 5 123973675 to 123973697 22 + TSS region transcription start site region 48827
Tssr48828 5 123973717 to 123973733 16 + TSS region transcription start site region 48828
Gm46922 5 123973868 to 123975478 1610 + lncRNA gene predicted gene, 46922
Tssr48829 5 123974419 to 123974423 4 + TSS region transcription start site region 48829
D5Mit160 5 123993857 to 123994000 143 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 160
Mir7032 5 123996852 to 123996930 78 + miRNA gene microRNA 7032
Tssr48830 5 123997362 to 123997374 12 + TSS region transcription start site region 48830
Cpgi16597 5 123997697 to 123998142 445 CpG island CpG island 16597
Tssr48831 5 123998675 to 123998720 45 + TSS region transcription start site region 48831
Vps37b 5 124004641 to 124032260 27619 - protein coding gene vacuolar protein sorting 37B
Gm37939 5 124004648 to 124006151 1503 + unclassified gene predicted gene, 37939
Tssr48832 5 124004988 to 124005008 20 + TSS region transcription start site region 48832
Tssr53284 5 124005617 to 124005648 31 - TSS region transcription start site region 53284
Tssr53285 5 124006115 to 124006154 39 - TSS region transcription start site region 53285
Tssr48833 5 124006467 to 124006490 23 + TSS region transcription start site region 48833
Tssr53286 5 124006471 to 124006494 23 - TSS region transcription start site region 53286
Tssr53287 5 124006551 to 124006569 18 - TSS region transcription start site region 53287
Tssr53288 5 124010712 to 124010718 6 - TSS region transcription start site region 53288
Tssr53289 5 124010790 to 124010803 13 - TSS region transcription start site region 53289
Tssr53290 5 124031018 to 124031022 4 - TSS region transcription start site region 53290
Cpgi16598 5 124031582 to 124032569 987 CpG island CpG island 16598
Tssr53291 5 124032214 to 124032290 76 - TSS region transcription start site region 53291
Gm34086 5 124032358 to 124046037 13679 + lincRNA gene predicted gene, 34086
Tssr48834 5 124032544 to 124032572 28 + TSS region transcription start site region 48834