Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123673426-123804414

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clip1 5 123577794 to 123684361 106567 - protein coding gene CAP-GLY domain containing linker protein 1
Gm42651 5 123682130 to 123683468 1338 - unclassified gene predicted gene 42651
Cpgi16590 5 123683455 to 123685035 1580 CpG island CpG island 16590
Tssr53263 5 123684275 to 123684286 11 - TSS region transcription start site region 53263
Tssr53264 5 123684289 to 123684379 90 - TSS region transcription start site region 53264
Gm43797 5 123684775 to 123685306 531 + unclassified gene predicted gene 43797
Tssr53265 5 123693478 to 123693481 3 - TSS region transcription start site region 53265
Zcchc8 5 123698302 to 123721044 22742 - protein coding gene zinc finger, CCHC domain containing 8
Tssr53266 5 123700064 to 123700072 8 - TSS region transcription start site region 53266
Tssr1630 5 123714044 to 123714046 2 + TSS region transcription start site region 1630
Tssr48803 5 123714893 to 123714900 7 + TSS region transcription start site region 48803
Cpgi16591 5 123720166 to 123721164 998 CpG island CpG island 16591
Tssr53267 5 123720933 to 123720960 27 - TSS region transcription start site region 53267
Tssr53268 5 123720962 to 123720973 11 - TSS region transcription start site region 53268
Tssr53269 5 123721007 to 123721062 55 - TSS region transcription start site region 53269
Tssr53270 5 123721063 to 123721074 11 - TSS region transcription start site region 53270
Tssr53271 5 123721090 to 123721112 22 - TSS region transcription start site region 53271
Gm19601 5 123725147 to 123725589 442 + pseudogene predicted gene, 19601
Rsrc2 5 123728426 to 123749414 20988 - protein coding gene arginine/serine-rich coiled-coil 2
Tssr53272 5 123736613 to 123736638 25 - TSS region transcription start site region 53272
Tssr53273 5 123745071 to 123745120 49 - TSS region transcription start site region 53273
Cpgi16592 5 123749094 to 123749894 800 CpG island CpG island 16592
Tssr53274 5 123749374 to 123749391 17 - TSS region transcription start site region 53274
Tssr53275 5 123749393 to 123749418 25 - TSS region transcription start site region 53275
Tssr48804 5 123749696 to 123749735 39 + TSS region transcription start site region 48804
Kntc1 5 123749716 to 123821593 71877 + protein coding gene kinetochore associated 1