Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123568201-123688347

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps33a 5 123528659 to 123573038 44379 - protein coding gene VPS33A CORVET/HOPS core subunit
Cpgi16589 5 123572638 to 123573189 551 CpG island CpG island 16589
Tssr53246 5 123572976 to 123573031 55 - TSS region transcription start site region 53246
Tssr53247 5 123573035 to 123573040 5 - TSS region transcription start site region 53247
Clip1 5 123577794 to 123684361 106567 - protein coding gene CAP-GLY domain containing linker protein 1
Tssr53248 5 123603675 to 123603706 31 - TSS region transcription start site region 53248
Tssr53249 5 123612153 to 123612178 25 - TSS region transcription start site region 53249
Tssr53250 5 123621846 to 123621850 4 - TSS region transcription start site region 53250
Gm24840 5 123628201 to 123628347 146 + snRNA gene predicted gene, 24840
Tssr48800 5 123630014 to 123630032 18 + TSS region transcription start site region 48800
Tssr53251 5 123637838 to 123637847 9 - TSS region transcription start site region 53251
Tssr48801 5 123641759 to 123641768 9 + TSS region transcription start site region 48801
Tssr53252 5 123661651 to 123661663 12 - TSS region transcription start site region 53252
Tssr53253 5 123661664 to 123661690 26 - TSS region transcription start site region 53253
Tssr48802 5 123662225 to 123662231 6 + TSS region transcription start site region 48802
Tssr53254 5 123666682 to 123666695 13 - TSS region transcription start site region 53254
Tssr53255 5 123666701 to 123666709 8 - TSS region transcription start site region 53255
Tssr53256 5 123666713 to 123666726 13 - TSS region transcription start site region 53256
Tssr53257 5 123670996 to 123671034 38 - TSS region transcription start site region 53257
Tssr53258 5 123671052 to 123671063 11 - TSS region transcription start site region 53258
Tssr53259 5 123671077 to 123671091 14 - TSS region transcription start site region 53259
Tssr53260 5 123671097 to 123671109 12 - TSS region transcription start site region 53260
Tssr53261 5 123671111 to 123671130 19 - TSS region transcription start site region 53261
Tssr53262 5 123671150 to 123671172 22 - TSS region transcription start site region 53262
Gm42651 5 123682130 to 123683468 1338 - unclassified gene predicted gene 42651
Cpgi16590 5 123683455 to 123685035 1580 CpG island CpG island 16590
Tssr53263 5 123684275 to 123684286 11 - TSS region transcription start site region 53263
Tssr53264 5 123684289 to 123684379 90 - TSS region transcription start site region 53264
Gm43797 5 123684775 to 123685306 531 + unclassified gene predicted gene 43797