MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:123483405-123564861

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16586	5	123489185 to 123489492	307		CpG island	CpG island 16586
Tssr48798	5	123489301 to 123489329	28	+	TSS region	transcription start site region 48798
Lrrc43	5	123489305 to 123508205	18900	+	protein coding gene	leucine rich repeat containing 43
Cpgi16587	5	123507978 to 123509012	1034		CpG island	CpG island 16587
Gm15751	5	123508395 to 123514011	5616	+	sense overlapping lncRNA gene	predicted gene 15751
Tssr48799	5	123508476 to 123508491	15	+	TSS region	transcription start site region 48799
B3gnt4	5	123510460 to 123511882	1422	+	protein coding gene	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
Diablo	5	123511330 to 123524164	12834	-	protein coding gene	diablo, IAP-binding mitochondrial protein
Gm49027	5	123512082 to 123525488	13406	-	protein coding gene	predicted gene, 49027
Gm24682	5	123518231 to 123518367	136	+	snoRNA gene	predicted gene, 24682
Mir7647	5	123522637 to 123522695	58	-	miRNA gene	microRNA 7647
Cpgi16588	5	123523405 to 123524861	1456		CpG island	CpG island 16588
Tssr53243	5	123524124 to 123524167	43	-	TSS region	transcription start site region 53243
Tssr53244	5	123525392 to 123525424	32	-	TSS region	transcription start site region 53244
Tssr53245	5	123525435 to 123525465	30	-	TSS region	transcription start site region 53245
Vps33a	5	123528659 to 123573038	44379	-	protein coding gene	VPS33A CORVET/HOPS core subunit
1700015O03Rik	5	123543791 to 123544359	568		unclassified gene	RIKEN cDNA 1700015O03 gene
Gm43133	5	123561525 to 123561987	462	-	unclassified gene	predicted gene 43133