MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:123248604-123318753

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Psmd9	5	123228190 to 123250126	21936	+	protein coding gene	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
Tssr1628	5	123248697 to 123248728	31	+	TSS region	transcription start site region 1628
Cpgi16581	5	123251928 to 123252269	341		CpG island	CpG island 16581
Gm42025	5	123252015 to 123253852	1837	+	lncRNA gene	predicted gene, 42025
Tssr48777	5	123252087 to 123252136	49	+	TSS region	transcription start site region 48777
Tssr48778	5	123253666 to 123253692	26	+	TSS region	transcription start site region 48778
Wdr66	5	123253856 to 123327484	73628	+	protein coding gene	WD repeat domain 66
Rpl35a-ps6	5	123255481 to 123255813	332	-	pseudogene	ribosomal protein L35A, pseudogene 6
Tssr48779	5	123273748 to 123273751	3	+	TSS region	transcription start site region 48779
D5Mit137	5	123283604 to 123283753	149		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 137
Gm15857	5	123293638 to 123310324	16686	-	antisense lncRNA gene	predicted gene 15857
Tssr48780	5	123302402 to 123302411	9	+	TSS region	transcription start site region 48780
Tssr48781	5	123302413 to 123302426	13	+	TSS region	transcription start site region 48781
Tssr48782	5	123302497 to 123302508	11	+	TSS region	transcription start site region 48782
Tssr53236	5	123310349 to 123310360	11	-	TSS region	transcription start site region 53236
Tssr48783	5	123310499 to 123310522	23	+	TSS region	transcription start site region 48783
Tssr48784	5	123310533 to 123310544	11	+	TSS region	transcription start site region 48784