Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
repro2 | 5 | 3605102 | heritable phenotypic marker | reproductive mutant 2, JAX Reproductive Mutagenesis Program | ||
Tssr48750 | 5 | 22 | + | TSS region | transcription start site region 48750 | |
Gm26745 | 5 | 183498 | - | lincRNA gene | predicted gene, 26745 | |
Tssr53193 | 5 | 39 | - | TSS region | transcription start site region 53193 | |
Cpgi16571 | 5 | 481 | CpG island | CpG island 16571 | ||
Tssr48751 | 5 | 27 | + | TSS region | transcription start site region 48751 | |
Gm6444 | 5 | 457 | + | pseudogene | predicted gene 6444 | |
Cpgi16572 | 5 | 1001 | CpG island | CpG island 16572 | ||
Tssr48752 | 5 | 27 | + | TSS region | transcription start site region 48752 | |
Tmem120b | 5 | 41181 | + | protein coding gene | transmembrane protein 120B | |
Tssr48753 | 5 | 79 | + | TSS region | transcription start site region 48753 | |
Tssr48754 | 5 | 15 | + | TSS region | transcription start site region 48754 | |
Tssr48755 | 5 | 14 | + | TSS region | transcription start site region 48755 | |
Gm43413 | 5 | 1565 | + | unclassified gene | predicted gene 43413 | |
Rhof | 5 | 14449 | - | protein coding gene | ras homolog family member F (in filopodia) | |
Tssr53194 | 5 | 11 | - | TSS region | transcription start site region 53194 | |
Tssr48756 | 5 | 15 | + | TSS region | transcription start site region 48756 | |
Tssr53195 | 5 | 10 | - | TSS region | transcription start site region 53195 | |
Tssr53196 | 5 | 7 | - | TSS region | transcription start site region 53196 | |
Tssr53197 | 5 | 13 | - | TSS region | transcription start site region 53197 | |
Tssr48757 | 5 | 34 | + | TSS region | transcription start site region 48757 | |
Cpgi16573 | 5 | 1245 | CpG island | CpG island 16573 | ||
Tssr53198 | 5 | 11 | - | TSS region | transcription start site region 53198 | |
Tssr53199 | 5 | 15 | - | TSS region | transcription start site region 53199 | |
Tssr53200 | 5 | 20 | - | TSS region | transcription start site region 53200 | |
Tssr53201 | 5 | 30 | - | TSS region | transcription start site region 53201 | |
Tssr53202 | 5 | 29 | - | TSS region | transcription start site region 53202 | |
Tssr53203 | 5 | 27 | - | TSS region | transcription start site region 53203 | |
AI480526 | 5 | 7943 | - | lincRNA gene | expressed sequence AI480526 | |
Gm38102 | 5 | 3756 | + | lincRNA gene | predicted gene, 38102 | |
Tssr53204 | 5 | 3 | - | TSS region | transcription start site region 53204 | |
Cpgi16574 | 5 | 266 | CpG island | CpG island 16574 | ||
Tssr53205 | 5 | 23 | - | TSS region | transcription start site region 53205 | |
Tssr53206 | 5 | 11 | - | TSS region | transcription start site region 53206 | |
Tssr48758 | 5 | 15 | + | TSS region | transcription start site region 48758 | |
Tssr48759 | 5 | 11 | + | TSS region | transcription start site region 48759 | |
Tssr48760 | 5 | 22 | + | TSS region | transcription start site region 48760 | |
Tssr53207 | 5 | 17 | - | TSS region | transcription start site region 53207 | |
Tssr48761 | 5 | 33 | + | TSS region | transcription start site region 48761 | |
Tssr53208 | 5 | 22 | - | TSS region | transcription start site region 53208 | |
Cpgi16575 | 5 | 178 | CpG island | CpG island 16575 | ||
Cpgi16576 | 5 | 840 | CpG island | CpG island 16576 | ||
Tssr48762 | 5 | 24 | + | TSS region | transcription start site region 48762 | |
Tssr48763 | 5 | 55 | + | TSS region | transcription start site region 48763 | |
4932422M17Rik | 5 | 2638 | + | lincRNA gene | RIKEN cDNA 4932422M17 gene | |
Tssr53209 | 5 | 17 | - | TSS region | transcription start site region 53209 | |
Tssr53210 | 5 | 11 | - | TSS region | transcription start site region 53210 | |
Tssr53211 | 5 | 25 | - | TSS region | transcription start site region 53211 | |
Tssr53212 | 5 | 14 | - | TSS region | transcription start site region 53212 | |
Tssr53213 | 5 | 20 | - | TSS region | transcription start site region 53213 | |
Tssr53214 | 5 | 15 | - | TSS region | transcription start site region 53214 | |
Tssr48764 | 5 | 16 | + | TSS region | transcription start site region 48764 | |
Tssr53215 | 5 | 53 | - | TSS region | transcription start site region 53215 | |
Cpgi16577 | 5 | 2278 | CpG island | CpG island 16577 | ||
Tssr53216 | 5 | 18 | - | TSS region | transcription start site region 53216 | |
Tssr48765 | 5 | 7 | + | TSS region | transcription start site region 48765 | |
Tssr48766 | 5 | 11 | + | TSS region | transcription start site region 48766 | |
Tssr48767 | 5 | 42 | + | TSS region | transcription start site region 48767 | |
Setd1b | 5 | 26436 | + | protein coding gene | SET domain containing 1B | |
Tssr48768 | 5 | 56 | + | TSS region | transcription start site region 48768 | |
Tssr48769 | 5 | 13 | + | TSS region | transcription start site region 48769 | |
Cpgi16578 | 5 | 196 | CpG island | CpG island 16578 | ||
Tssr53217 | 5 | 4 | - | TSS region | transcription start site region 53217 | |
Gm42024 | 5 | 534 | - | lncRNA gene | predicted gene, 42024 | |
Cpgi16579 | 5 | 559 | CpG island | CpG island 16579 | ||
Tssr48770 | 5 | 23 | + | TSS region | transcription start site region 48770 | |
Tssr48771 | 5 | 21 | + | TSS region | transcription start site region 48771 | |
Hpd | 5 | 10879 | - | protein coding gene | 4-hydroxyphenylpyruvic acid dioxygenase | |
Tssr53218 | 5 | 26 | - | TSS region | transcription start site region 53218 | |
Tssr53219 | 5 | 7 | - | TSS region | transcription start site region 53219 | |
Tssr53220 | 5 | 7 | - | TSS region | transcription start site region 53220 | |
Tssr53221 | 5 | 19 | - | TSS region | transcription start site region 53221 | |
Tssr53222 | 5 | 9 | - | TSS region | transcription start site region 53222 | |
Tssr53223 | 5 | 16 | - | TSS region | transcription start site region 53223 | |
Tssr53224 | 5 | 28 | - | TSS region | transcription start site region 53224 | |
Tssr53225 | 5 | 47 | - | TSS region | transcription start site region 53225 | |
Tssr48772 | 5 | 37 | + | TSS region | transcription start site region 48772 | |
Tssr53226 | 5 | 20 | - | TSS region | transcription start site region 53226 | |
Tssr48773 | 5 | 37 | + | TSS region | transcription start site region 48773 | |
Tssr53227 | 5 | 10 | - | TSS region | transcription start site region 53227 | |
Tssr53228 | 5 | 11 | - | TSS region | transcription start site region 53228 | |
Tssr53229 | 5 | 12 | - | TSS region | transcription start site region 53229 | |
Tssr53230 | 5 | 11 | - | TSS region | transcription start site region 53230 | |
Tssr53231 | 5 | 12 | - | TSS region | transcription start site region 53231 | |
Tssr53232 | 5 | 5 | - | TSS region | transcription start site region 53232 | |
Tssr53233 | 5 | 23 | - | TSS region | transcription start site region 53233 | |
Tssr53234 | 5 | 6 | - | TSS region | transcription start site region 53234 | |
Tssr53235 | 5 | 27 | - | TSS region | transcription start site region 53235 | |
Gm43409 | 5 | 2887 | - | lincRNA gene | predicted gene 43409 | |
Cpgi16580 | 5 | 603 | CpG island | CpG island 16580 | ||
Psmd9 | 5 | 21936 | + | protein coding gene | proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 | |
Tssr48774 | 5 | 11 | + | TSS region | transcription start site region 48774 | |
Tssr48775 | 5 | 63 | + | TSS region | transcription start site region 48775 | |
Tssr48776 | 5 | 42 | + | TSS region | transcription start site region 48776 | |
Tssr1628 | 5 | 31 | + | TSS region | transcription start site region 1628 | |
Cpgi16581 | 5 | 341 | CpG island | CpG island 16581 | ||
Gm42025 | 5 | 1837 | + | lncRNA gene | predicted gene, 42025 | |
Tssr48777 | 5 | 49 | + | TSS region | transcription start site region 48777 | |
Tssr48778 | 5 | 26 | + | TSS region | transcription start site region 48778 | |
Wdr66 | 5 | 73628 | + | protein coding gene | WD repeat domain 66 | |
Rpl35a-ps6 | 5 | 332 | - | pseudogene | ribosomal protein L35A, pseudogene 6 | |
Tssr48779 | 5 | 3 | + | TSS region | transcription start site region 48779 | |
D5Mit137 | 5 | 149 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 137 | ||
Gm15857 | 5 | 16686 | - | antisense lncRNA gene | predicted gene 15857 | |
Tssr48780 | 5 | 9 | + | TSS region | transcription start site region 48780 | |
Tssr48781 | 5 | 13 | + | TSS region | transcription start site region 48781 | |
Tssr48782 | 5 | 11 | + | TSS region | transcription start site region 48782 | |
Tssr53236 | 5 | 11 | - | TSS region | transcription start site region 53236 | |
Tssr48783 | 5 | 23 | + | TSS region | transcription start site region 48783 | |
Tssr48784 | 5 | 11 | + | TSS region | transcription start site region 48784 | |
Gm15860 | 5 | 10825 | - | antisense lncRNA gene | predicted gene 15860 | |
Tssr48785 | 5 | 14 | + | TSS region | transcription start site region 48785 | |
Cpgi16582 | 5 | 1870 | CpG island | CpG island 16582 | ||
Tssr48786 | 5 | 11 | + | TSS region | transcription start site region 48786 | |
Tssr48787 | 5 | 136 | + | TSS region | transcription start site region 48787 | |
Bcl7a | 5 | 29635 | + | protein coding gene | B cell CLL/lymphoma 7A | |
Tssr48788 | 5 | 47 | + | TSS region | transcription start site region 48788 | |
Tssr48789 | 5 | 9 | + | TSS region | transcription start site region 48789 | |
Tssr1629 | 5 | 4 | + | TSS region | transcription start site region 1629 | |
Tssr53237 | 5 | 5 | - | TSS region | transcription start site region 53237 | |
Gm23458 | 5 | 168 | + | snRNA gene | predicted gene, 23458 | |
5830487J09Rik | 5 | 2447 | + | unclassified gene | RIKEN cDNA 5830487J09 gene | |
Cpgi16583 | 5 | 362 | CpG island | CpG island 16583 | ||
Cpgi16584 | 5 | 224 | CpG island | CpG island 16584 | ||
Gm15747 | 5 | 4308 | - | antisense lncRNA gene | predicted gene 15747 | |
Cpgi16585 | 5 | 1216 | CpG island | CpG island 16585 | ||
Tssr53238 | 5 | 3 | - | TSS region | transcription start site region 53238 | |
Tssr48790 | 5 | 9 | + | TSS region | transcription start site region 48790 | |
Tssr48791 | 5 | 44 | + | TSS region | transcription start site region 48791 | |
Mlxip | 5 | 63134 | + | protein coding gene | MLX interacting protein | |
Gm42907 | 5 | 2147 | + | unclassified gene | predicted gene 42907 | |
Tssr53239 | 5 | 35 | - | TSS region | transcription start site region 53239 | |
Gm42908 | 5 | 869 | + | unclassified gene | predicted gene 42908 | |
Tssr48792 | 5 | 10 | + | TSS region | transcription start site region 48792 | |
D5Mit413 | 5 | 148 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 413 | ||
Gm43813 | 5 | 5377 | + | unclassified non-coding RNA gene | predicted gene 43813 | |
D5Mit65 | 5 | 138 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 65 | ||
Tssr48793 | 5 | 7 | + | TSS region | transcription start site region 48793 | |
Tssr48794 | 5 | 6 | + | TSS region | transcription start site region 48794 | |
Tssr48795 | 5 | 14 | + | TSS region | transcription start site region 48795 | |
Tssr48796 | 5 | 15 | + | TSS region | transcription start site region 48796 | |
Tssr48797 | 5 | 37 | + | TSS region | transcription start site region 48797 | |
Rpl31-ps6 | 5 | 377 | + | pseudogene | ribosomal protein L31, pseudogene 6 | |
Il31 | 5 | 2485 | - | protein coding gene | interleukin 31 | |
Tssr53240 | 5 | 29 | - | TSS region | transcription start site region 53240 | |
Tssr53241 | 5 | 18 | - | TSS region | transcription start site region 53241 | |
Tssr53242 | 5 | 11 | - | TSS region | transcription start site region 53242 | |
Cpgi16586 | 5 | 307 | CpG island | CpG island 16586 | ||
Tssr48798 | 5 | 28 | + | TSS region | transcription start site region 48798 | |
Lrrc43 | 5 | 18900 | + | protein coding gene | leucine rich repeat containing 43 | |
Cpgi16587 | 5 | 1034 | CpG island | CpG island 16587 | ||
Gm15751 | 5 | 5616 | + | sense overlapping lncRNA gene | predicted gene 15751 | |
Tssr48799 | 5 | 15 | + | TSS region | transcription start site region 48799 | |
B3gnt4 | 5 | 1422 | + | protein coding gene | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 | |
Diablo | 5 | 12834 | - | protein coding gene | diablo, IAP-binding mitochondrial protein | |
Gm49027 | 5 | 13406 | - | protein coding gene | predicted gene, 49027 | |
Gm24682 | 5 | 136 | + | snoRNA gene | predicted gene, 24682 | |
Mir7647 | 5 | 58 | - | miRNA gene | microRNA 7647 | |
Cpgi16588 | 5 | 1456 | CpG island | CpG island 16588 | ||
Tssr53243 | 5 | 43 | - | TSS region | transcription start site region 53243 | |
Tssr53244 | 5 | 32 | - | TSS region | transcription start site region 53244 | |
Tssr53245 | 5 | 30 | - | TSS region | transcription start site region 53245 | |
Vps33a | 5 | 44379 | - | protein coding gene | VPS33A CORVET/HOPS core subunit | |
1700015O03Rik | 5 | 568 | unclassified gene | RIKEN cDNA 1700015O03 gene | ||
Gm43133 | 5 | 462 | - | unclassified gene | predicted gene 43133 | |
Cpgi16589 | 5 | 551 | CpG island | CpG island 16589 | ||
Tssr53246 | 5 | 55 | - | TSS region | transcription start site region 53246 | |
Tssr53247 | 5 | 5 | - | TSS region | transcription start site region 53247 | |
Clip1 | 5 | 106567 | - | protein coding gene | CAP-GLY domain containing linker protein 1 | |
Tssr53248 | 5 | 31 | - | TSS region | transcription start site region 53248 | |
Tssr53249 | 5 | 25 | - | TSS region | transcription start site region 53249 | |
Tssr53250 | 5 | 4 | - | TSS region | transcription start site region 53250 | |
Gm24840 | 5 | 146 | + | snRNA gene | predicted gene, 24840 | |
Tssr48800 | 5 | 18 | + | TSS region | transcription start site region 48800 | |
Tssr53251 | 5 | 9 | - | TSS region | transcription start site region 53251 | |
Tssr48801 | 5 | 9 | + | TSS region | transcription start site region 48801 | |
Tssr53252 | 5 | 12 | - | TSS region | transcription start site region 53252 | |
Tssr53253 | 5 | 26 | - | TSS region | transcription start site region 53253 | |
Tssr48802 | 5 | 6 | + | TSS region | transcription start site region 48802 | |
Tssr53254 | 5 | 13 | - | TSS region | transcription start site region 53254 | |
Tssr53255 | 5 | 8 | - | TSS region | transcription start site region 53255 | |
Tssr53256 | 5 | 13 | - | TSS region | transcription start site region 53256 | |
Tssr53257 | 5 | 38 | - | TSS region | transcription start site region 53257 | |
Tssr53258 | 5 | 11 | - | TSS region | transcription start site region 53258 | |
Tssr53259 | 5 | 14 | - | TSS region | transcription start site region 53259 | |
Tssr53260 | 5 | 12 | - | TSS region | transcription start site region 53260 | |
Tssr53261 | 5 | 19 | - | TSS region | transcription start site region 53261 | |
Tssr53262 | 5 | 22 | - | TSS region | transcription start site region 53262 | |
Gm42651 | 5 | 1338 | - | unclassified gene | predicted gene 42651 | |
Cpgi16590 | 5 | 1580 | CpG island | CpG island 16590 | ||
Tssr53263 | 5 | 11 | - | TSS region | transcription start site region 53263 | |
Tssr53264 | 5 | 90 | - | TSS region | transcription start site region 53264 | |
Gm43797 | 5 | 531 | + | unclassified gene | predicted gene 43797 | |
Tssr53265 | 5 | 3 | - | TSS region | transcription start site region 53265 | |
Zcchc8 | 5 | 22742 | - | protein coding gene | zinc finger, CCHC domain containing 8 | |
Tssr53266 | 5 | 8 | - | TSS region | transcription start site region 53266 | |
Tssr1630 | 5 | 2 | + | TSS region | transcription start site region 1630 | |
Tssr48803 | 5 | 7 | + | TSS region | transcription start site region 48803 | |
Cpgi16591 | 5 | 998 | CpG island | CpG island 16591 | ||
Tssr53267 | 5 | 27 | - | TSS region | transcription start site region 53267 |