Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123015918-123136919

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orai1 5 123015074 to 123030452 15378 + protein coding gene ORAI calcium release-activated calcium modulator 1
Tssr53185 5 123015946 to 123015957 11 - TSS region transcription start site region 53185
Tssr53186 5 123015969 to 123015980 11 - TSS region transcription start site region 53186
Tssr48747 5 123016229 to 123016240 11 + TSS region transcription start site region 48747
Tssr53187 5 123017557 to 123017575 18 - TSS region transcription start site region 53187
Tssr53188 5 123018944 to 123018949 5 - TSS region transcription start site region 53188
Tssr53189 5 123018970 to 123018977 7 - TSS region transcription start site region 53189
Cpgi16568 5 123029128 to 123029610 482 CpG island CpG island 16568
Morn3 5 123035769 to 123047016 11247 - protein coding gene MORN repeat containing 3
Gm43412 5 123036000 to 123038817 2817 + unclassified gene predicted gene 43412
Tssr53190 5 123036003 to 123036007 4 - TSS region transcription start site region 53190
Tssr48748 5 123036224 to 123036228 4 + TSS region transcription start site region 48748
Cpgi16569 5 123036796 to 123036973 177 CpG island CpG island 16569
Gm42023 5 123037860 to 123041582 3722 + lncRNA gene predicted gene, 42023
Cpgi16570 5 123039097 to 123039576 479 CpG island CpG island 16570
Tssr48749 5 123041071 to 123041086 15 + TSS region transcription start site region 48749
Tssr53191 5 123046966 to 123046988 22 - TSS region transcription start site region 53191
Tssr53192 5 123046999 to 123047025 26 - TSS region transcription start site region 53192
Tssr48750 5 123047100 to 123047122 22 + TSS region transcription start site region 48750
Gm26745 5 123047373 to 123230871 183498 - lincRNA gene predicted gene, 26745
Tssr53193 5 123049380 to 123049419 39 - TSS region transcription start site region 53193
Cpgi16571 5 123057799 to 123058280 481 CpG island CpG island 16571
Tssr48751 5 123066207 to 123066234 27 + TSS region transcription start site region 48751
Gm6444 5 123066242 to 123066699 457 + pseudogene predicted gene 6444
Cpgi16572 5 123075918 to 123076919 1001 CpG island CpG island 16572
Tssr48752 5 123076105 to 123076132 27 + TSS region transcription start site region 48752
Tmem120b 5 123076264 to 123117445 41181 + protein coding gene transmembrane protein 120B
Tssr48753 5 123076275 to 123076354 79 + TSS region transcription start site region 48753
Tssr48754 5 123076411 to 123076426 15 + TSS region transcription start site region 48754
Tssr48755 5 123104165 to 123104179 14 + TSS region transcription start site region 48755
Gm43413 5 123110696 to 123112261 1565 + unclassified gene predicted gene 43413
Rhof 5 123118180 to 123132629 14449 - protein coding gene ras homolog family member F (in filopodia)
Tssr53194 5 123128512 to 123128523 11 - TSS region transcription start site region 53194
Tssr48756 5 123128619 to 123128634 15 + TSS region transcription start site region 48756
Tssr53195 5 123130824 to 123130834 10 - TSS region transcription start site region 53195
Tssr53196 5 123130845 to 123130852 7 - TSS region transcription start site region 53196
Tssr53197 5 123130855 to 123130868 13 - TSS region transcription start site region 53197
Tssr48757 5 123131005 to 123131039 34 + TSS region transcription start site region 48757
Cpgi16573 5 123131930 to 123133175 1245 CpG island CpG island 16573
Tssr53198 5 123132272 to 123132283 11 - TSS region transcription start site region 53198
Tssr53199 5 123132302 to 123132317 15 - TSS region transcription start site region 53199
Tssr53200 5 123132383 to 123132403 20 - TSS region transcription start site region 53200
Tssr53201 5 123132404 to 123132434 30 - TSS region transcription start site region 53201
Tssr53202 5 123132577 to 123132606 29 - TSS region transcription start site region 53202
Tssr53203 5 123132651 to 123132678 27 - TSS region transcription start site region 53203
AI480526 5 123133723 to 123141666 7943 - lincRNA gene expressed sequence AI480526
Gm38102 5 123133939 to 123137695 3756 + lincRNA gene predicted gene, 38102
Tssr53204 5 123134170 to 123134173 3 - TSS region transcription start site region 53204
Cpgi16574 5 123135465 to 123135731 266 CpG island CpG island 16574
Tssr53205 5 123135507 to 123135530 23 - TSS region transcription start site region 53205
Tssr53206 5 123135548 to 123135559 11 - TSS region transcription start site region 53206
Tssr48758 5 123135617 to 123135632 15 + TSS region transcription start site region 48758
Tssr48759 5 123135791 to 123135802 11 + TSS region transcription start site region 48759
Tssr48760 5 123135833 to 123135855 22 + TSS region transcription start site region 48760
Tssr53207 5 123136538 to 123136555 17 - TSS region transcription start site region 53207
Tssr48761 5 123136639 to 123136672 33 + TSS region transcription start site region 48761