Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123004513-123025900

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm44574	5	122987683 to 123012874	25191	-	unclassified non-coding RNA gene	predicted gene 44574
Gm2479	5	123007293 to 123014917	7624	-	antisense lncRNA gene	predicted gene 2479
Tssr53182	5	123012876 to 123012880	4	-	TSS region	transcription start site region 53182
Cpgi16567	5	123014513 to 123015900	1387		CpG island	CpG island 16567
Tssr53183	5	123014840 to 123014863	23	-	TSS region	transcription start site region 53183
Tssr48743	5	123015010 to 123015118	108	+	TSS region	transcription start site region 48743
Orai1	5	123015074 to 123030452	15378	+	protein coding gene	ORAI calcium release-activated calcium modulator 1
Tssr48744	5	123015144 to 123015153	9	+	TSS region	transcription start site region 48744
Tssr48745	5	123015280 to 123015299	19	+	TSS region	transcription start site region 48745
Tssr48746	5	123015312 to 123015335	23	+	TSS region	transcription start site region 48746
Tssr53184	5	123015895 to 123015910	15	-	TSS region	transcription start site region 53184
Tssr53185	5	123015946 to 123015957	11	-	TSS region	transcription start site region 53185
Tssr53186	5	123015969 to 123015980	11	-	TSS region	transcription start site region 53186
Tssr48747	5	123016229 to 123016240	11	+	TSS region	transcription start site region 48747
Tssr53187	5	123017557 to 123017575	18	-	TSS region	transcription start site region 53187
Tssr53188	5	123018944 to 123018949	5	-	TSS region	transcription start site region 53188
Tssr53189	5	123018970 to 123018977	7	-	TSS region	transcription start site region 53189