Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122997342-123081582

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44574 5 122987683 to 123012874 25191 - unclassified non-coding RNA gene predicted gene 44574
A930024E05Rik 5 122989354 to 122998345 8991 + antisense lncRNA gene RIKEN cDNA A930024E05 gene
Gm2479 5 123007293 to 123014917 7624 - antisense lncRNA gene predicted gene 2479
Tssr53182 5 123012876 to 123012880 4 - TSS region transcription start site region 53182
Cpgi16567 5 123014513 to 123015900 1387 CpG island CpG island 16567
Tssr53183 5 123014840 to 123014863 23 - TSS region transcription start site region 53183
Tssr48743 5 123015010 to 123015118 108 + TSS region transcription start site region 48743
Orai1 5 123015074 to 123030452 15378 + protein coding gene ORAI calcium release-activated calcium modulator 1
Tssr48744 5 123015144 to 123015153 9 + TSS region transcription start site region 48744
Tssr48745 5 123015280 to 123015299 19 + TSS region transcription start site region 48745
Tssr48746 5 123015312 to 123015335 23 + TSS region transcription start site region 48746
Tssr53184 5 123015895 to 123015910 15 - TSS region transcription start site region 53184
Tssr53185 5 123015946 to 123015957 11 - TSS region transcription start site region 53185
Tssr53186 5 123015969 to 123015980 11 - TSS region transcription start site region 53186
Tssr48747 5 123016229 to 123016240 11 + TSS region transcription start site region 48747
Tssr53187 5 123017557 to 123017575 18 - TSS region transcription start site region 53187
Tssr53188 5 123018944 to 123018949 5 - TSS region transcription start site region 53188
Tssr53189 5 123018970 to 123018977 7 - TSS region transcription start site region 53189
Cpgi16568 5 123029128 to 123029610 482 CpG island CpG island 16568
Morn3 5 123035769 to 123047016 11247 - protein coding gene MORN repeat containing 3
Gm43412 5 123036000 to 123038817 2817 + unclassified gene predicted gene 43412
Tssr53190 5 123036003 to 123036007 4 - TSS region transcription start site region 53190
Tssr48748 5 123036224 to 123036228 4 + TSS region transcription start site region 48748
Cpgi16569 5 123036796 to 123036973 177 CpG island CpG island 16569
Gm42023 5 123037860 to 123041582 3722 + lncRNA gene predicted gene, 42023
Cpgi16570 5 123039097 to 123039576 479 CpG island CpG island 16570
Tssr48749 5 123041071 to 123041086 15 + TSS region transcription start site region 48749
Tssr53191 5 123046966 to 123046988 22 - TSS region transcription start site region 53191
Tssr53192 5 123046999 to 123047025 26 - TSS region transcription start site region 53192
Tssr48750 5 123047100 to 123047122 22 + TSS region transcription start site region 48750
Gm26745 5 123047373 to 123230871 183498 - lincRNA gene predicted gene, 26745
Tssr53193 5 123049380 to 123049419 39 - TSS region transcription start site region 53193
Cpgi16571 5 123057799 to 123058280 481 CpG island CpG island 16571
Tssr48751 5 123066207 to 123066234 27 + TSS region transcription start site region 48751
Gm6444 5 123066242 to 123066699 457 + pseudogene predicted gene 6444
Cpgi16572 5 123075918 to 123076919 1001 CpG island CpG island 16572
Tssr48752 5 123076105 to 123076132 27 + TSS region transcription start site region 48752
Tmem120b 5 123076264 to 123117445 41181 + protein coding gene transmembrane protein 120B
Tssr48753 5 123076275 to 123076354 79 + TSS region transcription start site region 48753
Tssr48754 5 123076411 to 123076426 15 + TSS region transcription start site region 48754