MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:122887088-122957103

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16562	5	122888523 to 122888756	233		CpG island	CpG island 16562
Tssr53156	5	122899109 to 122899113	4	-	TSS region	transcription start site region 53156
Cpgi16563	5	122899242 to 122901264	2022		CpG island	CpG island 16563
Tssr53157	5	122900267 to 122900377	110	-	TSS region	transcription start site region 53157
Tssr53158	5	122901698 to 122901720	22	-	TSS region	transcription start site region 53158
Gm43411	5	122906822 to 122908400	1578	-	unclassified gene	predicted gene 43411
Tssr53159	5	122915035 to 122915041	6	-	TSS region	transcription start site region 53159
Tssr53160	5	122922088 to 122922103	15	-	TSS region	transcription start site region 53160
Gm33118	5	122942237 to 122952325	10088	+	lncRNA gene	predicted gene, 33118
Tssr48727	5	122942598 to 122942612	14	+	TSS region	transcription start site region 48727
Tssr53161	5	122949157 to 122949194	37	-	TSS region	transcription start site region 53161
Tssr53162	5	122949200 to 122949210	10	-	TSS region	transcription start site region 53162
Tssr53163	5	122949233 to 122949248	15	-	TSS region	transcription start site region 53163
Tssr48728	5	122949511 to 122949554	43	+	TSS region	transcription start site region 48728
Cpgi16564	5	122951556 to 122952738	1182		CpG island	CpG island 16564
Tssr53164	5	122951824 to 122951860	36	-	TSS region	transcription start site region 53164
Tssr53165	5	122952192 to 122952202	10	-	TSS region	transcription start site region 53165
Tssr53166	5	122952685 to 122952689	4	-	TSS region	transcription start site region 53166