Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122800167-122900178

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Anapc5	5	122787459 to 122821339	33880	-	protein coding gene	anaphase-promoting complex subunit 5
Cpgi16560	5	122820839 to 122821460	621		CpG island	CpG island 16560
Tssr48721	5	122820998 to 122821009	11	+	TSS region	transcription start site region 48721
Tssr53153	5	122821258 to 122821292	34	-	TSS region	transcription start site region 53153
Tssr53154	5	122821298 to 122821315	17	-	TSS region	transcription start site region 53154
Gm33044	5	122849628 to 122850136	508	-	lncRNA gene	predicted gene, 33044
Cpgi16561	5	122849792 to 122850923	1131		CpG island	CpG island 16561
Tssr53155	5	122849872 to 122849890	18	-	TSS region	transcription start site region 53155
Tssr48722	5	122850135 to 122850142	7	+	TSS region	transcription start site region 48722
Tssr48723	5	122850154 to 122850165	11	+	TSS region	transcription start site region 48723
Rnf34	5	122850162 to 122868945	18783	+	protein coding gene	ring finger protein 34
Tssr48724	5	122850167 to 122850178	11	+	TSS region	transcription start site region 48724
Tssr48725	5	122850186 to 122850198	12	+	TSS region	transcription start site region 48725
Tssr48726	5	122850199 to 122850214	15	+	TSS region	transcription start site region 48726
Kdm2b	5	122870664 to 122989162	118498	-	protein coding gene	lysine (K)-specific demethylase 2B
Cpgi16562	5	122888523 to 122888756	233		CpG island	CpG island 16562
Tssr53156	5	122899109 to 122899113	4	-	TSS region	transcription start site region 53156
Cpgi16563	5	122899242 to 122901264	2022		CpG island	CpG island 16563