Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122506469-122659853

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22965 5 122506789 to 122506889 100 + snRNA gene predicted gene, 22965
1700040P09Rik 5 122513209 to 122516582 3373 + lncRNA gene RIKEN cDNA 1700040P09 gene
Tssr48702 5 122513994 to 122514023 29 + TSS region transcription start site region 48702
Tssr53138 5 122520806 to 122520810 4 - TSS region transcription start site region 53138
Tssr48703 5 122525436 to 122525469 33 + TSS region transcription start site region 48703
Ift81 5 122550204 to 122614518 64314 - protein coding gene intraflagellar transport 81
Tssr53139 5 122560703 to 122560716 13 - TSS region transcription start site region 53139
Tssr53140 5 122560738 to 122560755 17 - TSS region transcription start site region 53140
Tssr53141 5 122560768 to 122560777 9 - TSS region transcription start site region 53141
Tssr53142 5 122560805 to 122560812 7 - TSS region transcription start site region 53142
Tssr53143 5 122560835 to 122560846 11 - TSS region transcription start site region 53143
Gm43541 5 122567524 to 122568104 580 - unclassified gene predicted gene 43541
Gm18941 5 122579883 to 122580621 738 + pseudogene predicted gene, 18941
Gm43301 5 122581469 to 122584853 3384 + antisense lncRNA gene predicted gene 43301
Cpgi16554 5 122613875 to 122614776 901 CpG island CpG island 16554
Tssr53144 5 122614486 to 122614544 58 - TSS region transcription start site region 53144
Tssr1627 5 122622414 to 122622423 9 - TSS region transcription start site region 1627
Gm32988 5 122624102 to 122628283 4181 + lncRNA gene predicted gene, 32988
Tssr48704 5 122643878 to 122643984 106 + TSS region transcription start site region 48704
P2rx7 5 122643911 to 122691432 47521 + protein coding gene purinergic receptor P2X, ligand-gated ion channel, 7
Cpgi16555 5 122644047 to 122644288 241 CpG island CpG island 16555
Tssr53145 5 122647553 to 122647578 25 - TSS region transcription start site region 53145
Tssr48705 5 122648334 to 122648346 12 + TSS region transcription start site region 48705
Tssr48706 5 122650376 to 122650393 17 + TSS region transcription start site region 48706
Tssr48707 5 122650405 to 122650412 7 + TSS region transcription start site region 48707
Tssr48708 5 122655591 to 122655595 4 + TSS region transcription start site region 48708