Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122351875-122391887

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rad9b 5 122323223 to 122354233 31010 - protein coding gene RAD9 checkpoint clamp component B
Cpgi16549 5 122353879 to 122355144 1265 CpG island CpG island 16549
Tssr53094 5 122354161 to 122354237 76 - TSS region transcription start site region 53094
Tssr48674 5 122354356 to 122354359 3 + TSS region transcription start site region 48674
Tssr48675 5 122354361 to 122354368 7 + TSS region transcription start site region 48675
Vps29 5 122354377 to 122364975 10598 + protein coding gene VPS29 retromer complex component
Tssr48676 5 122354385 to 122354455 70 + TSS region transcription start site region 48676
Fam216a 5 122364584 to 122371963 7379 - protein coding gene family with sequence similarity 216, member A
D5Mit118 5 122366221 to 122366356 135 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 118
Cpgi16550 5 122371638 to 122372909 1271 CpG island CpG island 16550
Tssr48677 5 122371875 to 122371887 12 + TSS region transcription start site region 48677
Tssr53095 5 122371975 to 122371980 5 - TSS region transcription start site region 53095
Tssr53096 5 122371987 to 122371998 11 - TSS region transcription start site region 53096
Tssr53097 5 122372012 to 122372070 58 - TSS region transcription start site region 53097
Tssr53098 5 122372230 to 122372390 160 - TSS region transcription start site region 53098
Tssr48678 5 122372445 to 122372477 32 + TSS region transcription start site region 48678
Tssr48679 5 122372494 to 122372513 19 + TSS region transcription start site region 48679
Gpn3 5 122372508 to 122382771 10263 + protein coding gene GPN-loop GTPase 3
Tssr48680 5 122372515 to 122372604 89 + TSS region transcription start site region 48680
Tssr48681 5 122372608 to 122372623 15 + TSS region transcription start site region 48681
Gm42830 5 122377408 to 122377720 312 + unclassified gene predicted gene 42830
Gm32853 5 122380057 to 122394812 14755 - lncRNA gene predicted gene, 32853
Cpgi16551 5 122391714 to 122392713 999 CpG island CpG island 16551
Tssr53099 5 122391741 to 122391762 21 - TSS region transcription start site region 53099
Arpc3 5 122391878 to 122406181 14303 + protein coding gene actin related protein 2/3 complex, subunit 3