MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:12214632-12898250

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm8953	5	12354680 to 12355375	695	-	pseudogene	predicted gene 8953
Tssr50122	5	12355771 to 12355780	9	-	TSS region	transcription start site region 50122
Gmmq8	5	12371157 to 12371157	0		QTL	gastrocnemius muscle mass QTL 8
Tssr45165	5	12374655 to 12374670	15	+	TSS region	transcription start site region 45165
Tssr45166	5	12383156 to 12383177	21	+	TSS region	transcription start site region 45166
Cpgi15547	5	12383193 to 12384026	833		CpG island	CpG island 15547
Tssr45167	5	12383300 to 12383322	22	+	TSS region	transcription start site region 45167
Tssr45168	5	12383325 to 12383336	11	+	TSS region	transcription start site region 45168
Tssr45169	5	12383341 to 12383351	10	+	TSS region	transcription start site region 45169
Tssr45170	5	12383377 to 12383395	18	+	TSS region	transcription start site region 45170
Sema3d	5	12383385 to 12588948	205563	+	protein coding gene	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Tssr45171	5	12383483 to 12383543	60	+	TSS region	transcription start site region 45171
Tssr45172	5	12466874 to 12466879	5	+	TSS region	transcription start site region 45172
Gm8925	5	12478866 to 12479628	762	-	pseudogene	predicted gene 8925
Gm42909	5	12554632 to 12558250	3618	+	unclassified gene	predicted gene 42909
Gm42580	5	12669155 to 12670728	1573	-	pseudogene	predicted gene 42580
Tssr1422	5	12719662 to 12719696	34	+	TSS region	transcription start site region 1422
Tssr45173	5	12719819 to 12719867	48	+	TSS region	transcription start site region 45173