Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121193657-121373666

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16520 5 121204439 to 121205176 737 CpG island CpG island 16520
Tssr48554 5 121204477 to 121204499 22 + TSS region transcription start site region 48554
Rpl6 5 121204501 to 121209241 4740 + protein coding gene ribosomal protein L6
Tssr48555 5 121204516 to 121204556 40 + TSS region transcription start site region 48555
Tssr48556 5 121204561 to 121204566 5 + TSS region transcription start site region 48556
Tssr48557 5 121204823 to 121204850 27 + TSS region transcription start site region 48557
Gm26205 5 121205010 to 121205143 133 + snoRNA gene predicted gene, 26205
Cpgi16521 5 121216209 to 121216429 220 CpG island CpG island 16521
Cpgi16522 5 121219778 to 121221698 1920 CpG island CpG island 16522
Tssr48558 5 121220191 to 121220243 52 + TSS region transcription start site region 48558
Hectd4 5 121220219 to 121368577 148358 + protein coding gene HECT domain E3 ubiquitin protein ligase 4
Tssr48559 5 121220247 to 121220274 27 + TSS region transcription start site region 48559
Tssr1622 5 121220306 to 121220309 3 + TSS region transcription start site region 1622
Tssr48560 5 121220385 to 121220390 5 + TSS region transcription start site region 48560
Tssr48561 5 121220405 to 121220415 10 + TSS region transcription start site region 48561
Tssr48562 5 121220421 to 121220424 3 + TSS region transcription start site region 48562
Tssr48563 5 121233011 to 121233015 4 + TSS region transcription start site region 48563
Tssr1623 5 121233145 to 121233148 3 + TSS region transcription start site region 1623
D5Mit242 5 121254712 to 121254856 144 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 242
Tssr48564 5 121283657 to 121283666 9 + TSS region transcription start site region 48564
Tssr48565 5 121283677 to 121283694 17 + TSS region transcription start site region 48565
Tssr48566 5 121288111 to 121288117 6 + TSS region transcription start site region 48566
Tssr53018 5 121330312 to 121330313 1 - TSS region transcription start site region 53018
Tssr48567 5 121353964 to 121353968 4 + TSS region transcription start site region 48567
Gm24671 5 121356844 to 121357001 157 + snRNA gene predicted gene, 24671
Tssr48568 5 121367092 to 121367110 18 + TSS region transcription start site region 48568
Tssr48569 5 121367207 to 121367211 4 + TSS region transcription start site region 48569
Trafd1 5 121371725 to 121385627 13902 - protein coding gene TRAF type zinc finger domain containing 1
Tssr53019 5 121373413 to 121373432 19 - TSS region transcription start site region 53019