MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:121105533-121216397

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr53012	5	121122171 to 121122185	14	-	TSS region	transcription start site region 53012
Ptpn11	5	121130533 to 121191397	60864	-	protein coding gene	protein tyrosine phosphatase, non-receptor type 11
Tssr53013	5	121157078 to 121157083	5	-	TSS region	transcription start site region 53013
Tssr53014	5	121163214 to 121163235	21	-	TSS region	transcription start site region 53014
Gm42930	5	121181737 to 121184996	3259	-	unclassified gene	predicted gene 42930
Cpgi16519	5	121190499 to 121191935	1436		CpG island	CpG island 16519
Tssr53015	5	121191349 to 121191361	12	-	TSS region	transcription start site region 53015
Tssr53016	5	121191365 to 121191400	35	-	TSS region	transcription start site region 53016
Tssr53017	5	121191409 to 121191420	11	-	TSS region	transcription start site region 53017
Tssr48553	5	121191484 to 121191523	39	+	TSS region	transcription start site region 48553
Cpgi16520	5	121204439 to 121205176	737		CpG island	CpG island 16520
Tssr48554	5	121204477 to 121204499	22	+	TSS region	transcription start site region 48554
Rpl6	5	121204501 to 121209241	4740	+	protein coding gene	ribosomal protein L6
Tssr48555	5	121204516 to 121204556	40	+	TSS region	transcription start site region 48555
Tssr48556	5	121204561 to 121204566	5	+	TSS region	transcription start site region 48556
Tssr48557	5	121204823 to 121204850	27	+	TSS region	transcription start site region 48557
Gm26205	5	121205010 to 121205143	133	+	snoRNA gene	predicted gene, 26205
Cpgi16521	5	121216209 to 121216429	220		CpG island	CpG island 16521