MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:120876881-121006893

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Oas1g	5	120876142 to 120887613	11471	-	protein coding gene	2'-5' oligoadenylate synthetase 1G
Tssr52994	5	120887598 to 120887612	14	-	TSS region	transcription start site region 52994
Oas1a	5	120896256 to 120907521	11265	-	protein coding gene	2'-5' oligoadenylate synthetase 1A
Tssr52995	5	120898191 to 120898209	18	-	TSS region	transcription start site region 52995
Tssr52996	5	120906649 to 120906658	9	-	TSS region	transcription start site region 52996
Tssr52997	5	120906875 to 120906894	19	-	TSS region	transcription start site region 52997
Tssr52998	5	120907510 to 120907533	23	-	TSS region	transcription start site region 52998
Gm7573	5	120913412 to 120932096	18684	-	pseudogene	predicted gene 7573
Oas1d	5	120914818 to 120921648	6830	+	protein coding gene	2'-5' oligoadenylate synthetase 1D
Rph3a	5	120940499 to 121010092	69593	-	protein coding gene	rabphilin 3A
Tssr52999	5	120941286 to 120941296	10	-	TSS region	transcription start site region 52999
Tssr53000	5	120941881 to 120941893	12	-	TSS region	transcription start site region 53000
Tssr53001	5	120941975 to 120941984	9	-	TSS region	transcription start site region 53001
Gm32185	5	120950395 to 120952768	2373	+	lncRNA gene	predicted gene, 32185
Tssr48552	5	120952759 to 120952761	2	+	TSS region	transcription start site region 48552
Tssr53002	5	120955456 to 120955463	7	-	TSS region	transcription start site region 53002
Gm42656	5	120970043 to 120972347	2304	-	unclassified gene	predicted gene 42656
Cpgi16517	5	121003888 to 121004105	217		CpG island	CpG island 16517