Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:120632346-120732672

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfap73	5	120628335 to 120634235	5900	-	protein coding gene	cilia and flagella associated protein 73
Tssr52950	5	120634276 to 120634294	18	-	TSS region	transcription start site region 52950
Gm42657	5	120641621 to 120641831	210	+	pseudogene	predicted gene 42657
Gm15749	5	120648040 to 120648749	709	+	lincRNA gene	predicted gene 15749
Cpgi16509	5	120648596 to 120649650	1054		CpG island	CpG island 16509
Rasal1	5	120648812 to 120679597	30785	+	protein coding gene	RAS protein activator like 1 (GAP1 like)
Tssr48531	5	120649213 to 120649259	46	+	TSS region	transcription start site region 48531
Tssr48532	5	120649336 to 120649347	11	+	TSS region	transcription start site region 48532
Tssr48533	5	120655385 to 120655389	4	+	TSS region	transcription start site region 48533
Cpgi16510	5	120662093 to 120662260	167		CpG island	CpG island 16510
Tssr48534	5	120678548 to 120678556	8	+	TSS region	transcription start site region 48534
Tssr48535	5	120678569 to 120678576	7	+	TSS region	transcription start site region 48535
Dtx1	5	120680203 to 120711669	31466	-	protein coding gene	deltex 1, E3 ubiquitin ligase
Cpgi16511	5	120680880 to 120681452	572		CpG island	CpG island 16511
Cpgi16512	5	120682346 to 120682672	326		CpG island	CpG island 16512
Tssr52951	5	120683105 to 120683157	52	-	TSS region	transcription start site region 52951
Tssr52952	5	120683414 to 120683461	47	-	TSS region	transcription start site region 52952
Tssr52953	5	120685746 to 120685767	21	-	TSS region	transcription start site region 52953
Cpgi16513	5	120692224 to 120692407	183		CpG island	CpG island 16513
Cpgi16514	5	120694174 to 120695520	1346		CpG island	CpG island 16514
Tssr52954	5	120694590 to 120694603	13	-	TSS region	transcription start site region 52954
Cpgi16515	5	120710067 to 120712162	2095		CpG island	CpG island 16515
Tssr52955	5	120711596 to 120711609	13	-	TSS region	transcription start site region 52955
Tssr52956	5	120711613 to 120711692	79	-	TSS region	transcription start site region 52956
Tssr52957	5	120711697 to 120711708	11	-	TSS region	transcription start site region 52957
Tssr48536	5	120711776 to 120711787	11	+	TSS region	transcription start site region 48536
Cpgi16516	5	120714348 to 120714547	199		CpG island	CpG island 16516
Oas2	5	120730333 to 120749853	19520	-	protein coding gene	2'-5' oligoadenylate synthetase 2