Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:120623335-120639235

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ddx54	5	120613107 to 120628592	15485	+	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gm43579	5	120626315 to 120627621	1306	-	antisense lncRNA gene	predicted gene 43579
Cpgi16506	5	120626749 to 120627241	492		CpG island	CpG island 16506
Cfap73	5	120628335 to 120634235	5900	-	protein coding gene	cilia and flagella associated protein 73
Cpgi16507	5	120629725 to 120630126	401		CpG island	CpG island 16507
Tssr1621	5	120629761 to 120629771	10	-	TSS region	transcription start site region 1621
Tssr52948	5	120629978 to 120629988	10	-	TSS region	transcription start site region 52948
Tssr52949	5	120630007 to 120630019	12	-	TSS region	transcription start site region 52949
Tssr48527	5	120630045 to 120630056	11	+	TSS region	transcription start site region 48527
Tssr48528	5	120630066 to 120630077	11	+	TSS region	transcription start site region 48528
Tssr48529	5	120630082 to 120630089	7	+	TSS region	transcription start site region 48529
Tssr48530	5	120630094 to 120630101	7	+	TSS region	transcription start site region 48530
Cpgi16508	5	120631092 to 120631761	669		CpG island	CpG island 16508
Tssr52950	5	120634276 to 120634294	18	-	TSS region	transcription start site region 52950