Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:120491168-120554024

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plbd2	5	120483893 to 120503623	19730	-	protein coding gene	phospholipase B domain containing 2
Tssr52928	5	120494400 to 120494421	21	-	TSS region	transcription start site region 52928
Cpgi16498	5	120502875 to 120503706	831		CpG island	CpG island 16498
Tssr52929	5	120503593 to 120503627	34	-	TSS region	transcription start site region 52929
Cpgi16499	5	120510999 to 120511584	585		CpG island	CpG island 16499
Slc8b1	5	120511168 to 120534024	22856	+	protein coding gene	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
Tssr48511	5	120511173 to 120511211	38	+	TSS region	transcription start site region 48511
Tssr48512	5	120511213 to 120511246	33	+	TSS region	transcription start site region 48512
Tssr48513	5	120513102 to 120513123	21	+	TSS region	transcription start site region 48513
Tssr52930	5	120516497 to 120516523	26	-	TSS region	transcription start site region 52930
Tssr48514	5	120519709 to 120519752	43	+	TSS region	transcription start site region 48514
Tpcn1	5	120534153 to 120588673	54520	-	protein coding gene	two pore channel 1
Tssr52931	5	120543942 to 120543975	33	-	TSS region	transcription start site region 52931
Tssr52932	5	120548266 to 120548269	3	-	TSS region	transcription start site region 52932
Tssr52933	5	120548295 to 120548309	14	-	TSS region	transcription start site region 52933
Tssr52934	5	120548329 to 120548340	11	-	TSS region	transcription start site region 52934
2510016D11Rik	5	120552055 to 120553039	984	-	unclassified gene	RIKEN cDNA 2510016D11 gene