Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:120473893-120513623

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr48510	5	120476522 to 120476538	16	+	TSS region	transcription start site region 48510
Sds	5	120476547 to 120483932	7385	+	protein coding gene	serine dehydratase
Gm15690	5	120479842 to 120480903	1061	-	antisense lncRNA gene	predicted gene 15690
Cpgi16497	5	120481389 to 120481615	226		CpG island	CpG island 16497
Plbd2	5	120483893 to 120503623	19730	-	protein coding gene	phospholipase B domain containing 2
Tssr52926	5	120485068 to 120485086	18	-	TSS region	transcription start site region 52926
Tssr52927	5	120486097 to 120486124	27	-	TSS region	transcription start site region 52927
Tssr52928	5	120494400 to 120494421	21	-	TSS region	transcription start site region 52928
Cpgi16498	5	120502875 to 120503706	831		CpG island	CpG island 16498
Tssr52929	5	120503593 to 120503627	34	-	TSS region	transcription start site region 52929
Cpgi16499	5	120510999 to 120511584	585		CpG island	CpG island 16499
Slc8b1	5	120511168 to 120534024	22856	+	protein coding gene	solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
Tssr48511	5	120511173 to 120511211	38	+	TSS region	transcription start site region 48511
Tssr48512	5	120511213 to 120511246	33	+	TSS region	transcription start site region 48512
Tssr48513	5	120513102 to 120513123	21	+	TSS region	transcription start site region 48513