Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:119470736-119670739

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31314 5 119518795 to 119527954 9159 - lincRNA gene predicted gene, 31314
Tssr52905 5 119527945 to 119527962 17 - TSS region transcription start site region 52905
Cpgi16450 5 119547090 to 119547381 291 CpG island CpG island 16450
Cpgi16451 5 119563881 to 119564309 428 CpG island CpG island 16451
AW549542 5 119570129 to 119580358 10229 - lncRNA gene expressed sequence AW549542
Tssr52906 5 119570736 to 119570739 3 - TSS region transcription start site region 52906
Tssr52907 5 119580532 to 119580550 18 - TSS region transcription start site region 52907
Tssr52908 5 119583719 to 119583730 11 - TSS region transcription start site region 52908
Gm43399 5 119595831 to 119598204 2373 - unclassified gene predicted gene 43399
Tbx3os1 5 119597977 to 119671328 73351 - antisense lncRNA gene T-box 3, opposite strand 1
Tssr52909 5 119616684 to 119616696 12 - TSS region transcription start site region 52909
Tssr48450 5 119625939 to 119625966 27 + TSS region transcription start site region 48450
Gm16063 5 119625942 to 119634462 8520 + lincRNA gene predicted gene 16063
Cpgi16452 5 119626755 to 119627010 255 CpG island CpG island 16452
Tssr52910 5 119628707 to 119628754 47 - TSS region transcription start site region 52910
Gm16064 5 119646134 to 119659262 13128 + lincRNA gene predicted gene 16064
Cpgi16453 5 119656918 to 119657142 224 CpG island CpG island 16453
Cpgi16454 5 119660656 to 119660937 281 CpG island CpG island 16454
Cpgi16455 5 119668188 to 119669140 952 CpG island CpG island 16455
Cpgi16456 5 119669654 to 119671483 1829 CpG island CpG island 16456
Tssr48451 5 119669876 to 119669916 40 + TSS region transcription start site region 48451
Tssr48452 5 119669943 to 119669954 11 + TSS region transcription start site region 48452
Tssr48453 5 119670400 to 119670407 7 + TSS region transcription start site region 48453
Tssr48454 5 119670658 to 119670676 18 + TSS region transcription start site region 48454
Tbx3 5 119670669 to 119684724 14055 + protein coding gene T-box 3
Tssr48455 5 119670699 to 119670704 5 + TSS region transcription start site region 48455
Tssr1615 5 119670712 to 119670721 9 + TSS region transcription start site region 1615
Tssr1616 5 119670726 to 119670730 4 + TSS region transcription start site region 1616