Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:119027009-119617022

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30895 5 119053626 to 119075293 21667 + lncRNA gene predicted gene, 30895
Gm31034 5 119075634 to 119086806 11172 - lncRNA gene predicted gene, 31034
Tssr52904 5 119080850 to 119080862 12 - TSS region transcription start site region 52904
Cpgi16444 5 119086107 to 119086706 599 CpG island CpG island 16444
1700081H04Rik 5 119108236 to 119114543 6307 + lincRNA gene RIKEN cDNA 1700081H04 gene
Tssr48447 5 119133644 to 119133673 29 + TSS region transcription start site region 48447
Gm31129 5 119133651 to 119138408 4757 + lncRNA gene predicted gene, 31129
Cpgi16445 5 119167918 to 119168109 191 CpG island CpG island 16445
Gm7538 5 119194484 to 119200018 5534 - lincRNA gene predicted gene 7538
Cpgi16446 5 119271089 to 119271430 341 CpG island CpG island 16446
Cpgi16447 5 119279173 to 119279382 209 CpG island CpG island 16447
Gm31190 5 119280244 to 119300425 20181 - lncRNA gene predicted gene, 31190
n-R5s175 5 119297245 to 119297361 116 + rRNA gene nuclear encoded rRNA 5S 175
Tssr48448 5 119322009 to 119322022 13 + TSS region transcription start site region 48448
Gm42016 5 119325999 to 119330526 4527 + lncRNA gene predicted gene, 42016
Tssr48449 5 119326009 to 119326041 32 + TSS region transcription start site region 48449
Cpgi16448 5 119374001 to 119374231 230 CpG island CpG island 16448
Mdq15 5 119440195 to 119440195 0 QTL mammary ductal QTL 15
Cpgi16449 5 119440660 to 119440878 218 CpG island CpG island 16449
Gm31314 5 119518795 to 119527954 9159 - lincRNA gene predicted gene, 31314
Tssr52905 5 119527945 to 119527962 17 - TSS region transcription start site region 52905
Cpgi16450 5 119547090 to 119547381 291 CpG island CpG island 16450
Cpgi16451 5 119563881 to 119564309 428 CpG island CpG island 16451
AW549542 5 119570129 to 119580358 10229 - lncRNA gene expressed sequence AW549542
Tssr52906 5 119570736 to 119570739 3 - TSS region transcription start site region 52906
Tssr52907 5 119580532 to 119580550 18 - TSS region transcription start site region 52907
Tssr52908 5 119583719 to 119583730 11 - TSS region transcription start site region 52908
Gm43399 5 119595831 to 119598204 2373 - unclassified gene predicted gene 43399
Tbx3os1 5 119597977 to 119671328 73351 - antisense lncRNA gene T-box 3, opposite strand 1
Tssr52909 5 119616684 to 119616696 12 - TSS region transcription start site region 52909