Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:118463843-118564506

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr52900 5 118466469 to 118466485 16 - TSS region transcription start site region 52900
Tssr52901 5 118477750 to 118477778 28 - TSS region transcription start site region 52901
Tssr52902 5 118477793 to 118477806 13 - TSS region transcription start site region 52902
Tssr48427 5 118478580 to 118478591 11 + TSS region transcription start site region 48427
Tssr48428 5 118486950 to 118486994 44 + TSS region transcription start site region 48428
Gm46921 5 118491256 to 118492630 1374 - lncRNA gene predicted gene, 46921
Gm15754 5 118499398 to 118503454 4056 + pseudogene predicted gene 15754
D5Mit407 5 118506247 to 118506341 94 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 407
Cpgi16436 5 118513843 to 118514506 663 CpG island CpG island 16436
Tssr52903 5 118514030 to 118514045 15 - TSS region transcription start site region 52903
Tssr48429 5 118556440 to 118556463 23 + TSS region transcription start site region 48429
Tssr48430 5 118556484 to 118556510 26 + TSS region transcription start site region 48430
Cpgi16437 5 118559379 to 118561786 2407 CpG island CpG island 16437
Tssr48431 5 118560281 to 118560307 26 + TSS region transcription start site region 48431
Tssr48432 5 118560358 to 118560453 95 + TSS region transcription start site region 48432
Tssr48433 5 118560624 to 118560690 66 + TSS region transcription start site region 48433
Med13l 5 118560701 to 118765438 204737 + protein coding gene mediator complex subunit 13-like
Tssr48434 5 118561104 to 118561128 24 + TSS region transcription start site region 48434
Tssr48435 5 118561139 to 118561150 11 + TSS region transcription start site region 48435
Tssr48436 5 118561154 to 118561172 18 + TSS region transcription start site region 48436
Gm43785 5 118561757 to 118563101 1344 - unclassified gene predicted gene 43785