MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:118372000-118472005

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm30604	5	118373154 to 118380918	7764	-	lncRNA gene	predicted gene, 30604
Tssr52896	5	118380484 to 118380502	18	-	TSS region	transcription start site region 52896
Cpgi16432	5	118380624 to 118381021	397		CpG island	CpG island 16432
Cpgi16433	5	118381344 to 118381586	242		CpG island	CpG island 16433
Tssr48422	5	118381646 to 118381658	12	+	TSS region	transcription start site region 48422
Cpgi16434	5	118396257 to 118396496	239		CpG island	CpG island 16434
Gm28563	5	118396806 to 118397330	524	-	lincRNA gene	predicted gene 28563
Gm30657	5	118402792 to 118413581	10789	-	lncRNA gene	predicted gene, 30657
Tssr48423	5	118404883 to 118404890	7	+	TSS region	transcription start site region 48423
Tssr52897	5	118413537 to 118413553	16	-	TSS region	transcription start site region 52897
Gm26455	5	118418727 to 118418818	91	-	miRNA gene	predicted gene, 26455
Tssr52898	5	118422000 to 118422005	5	-	TSS region	transcription start site region 52898
Cpgi16435	5	118422652 to 118422860	208		CpG island	CpG island 16435
Tssr52899	5	118434816 to 118434848	32	-	TSS region	transcription start site region 52899
Tssr48424	5	118435840 to 118435848	8	+	TSS region	transcription start site region 48424
Tssr48425	5	118437485 to 118437495	10	+	TSS region	transcription start site region 48425
Tssr48426	5	118437510 to 118437518	8	+	TSS region	transcription start site region 48426
Gm30746	5	118462049 to 118463084	1035	+	lncRNA gene	predicted gene, 30746
Tssr52900	5	118466469 to 118466485	16	-	TSS region	transcription start site region 52900