MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:117767113-117917167

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ksr2	5	117414000 to 117775003	361003	+	protein coding gene	kinase suppressor of ras 2
Tssr48398	5	117769612 to 117769614	2	+	TSS region	transcription start site region 48398
Tssr48399	5	117781017 to 117781075	58	+	TSS region	transcription start site region 48399
Nos1	5	117781032 to 117958840	177808	+	protein coding gene	nitric oxide synthase 1, neuronal
Cpgi16419	5	117841754 to 117842962	1208		CpG island	CpG island 16419
Tssr48400	5	117841839 to 117841857	18	+	TSS region	transcription start site region 48400
Tssr48401	5	117841884 to 117841925	41	+	TSS region	transcription start site region 48401
Tssr48402	5	117841930 to 117841939	9	+	TSS region	transcription start site region 48402
Tssr48403	5	117842113 to 117842167	54	+	TSS region	transcription start site region 48403
Gm30360	5	117857197 to 117879326	22129	-	lncRNA gene	predicted gene, 30360
Gm37028	5	117872813 to 117872919	106	+	unclassified gene	predicted gene, 37028
D5Mit188	5	117879630 to 117879777	147		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 188
Tssr52888	5	117900383 to 117900385	2	-	TSS region	transcription start site region 52888
Tssr52889	5	117909518 to 117909523	5	-	TSS region	transcription start site region 52889
Tssr48404	5	117910023 to 117910029	6	+	TSS region	transcription start site region 48404
D5Mit210a	5	117910948 to 117911226	278		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 210a
D5Mit210b	5	117911019 to 117911226	207		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 210b