MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:117412507-117556260

Filter by:

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16415	5	117413413 to 117414459	1046		CpG island	CpG island 16415
Tssr48389	5	117413766 to 117413785	19	+	TSS region	transcription start site region 48389
Tssr48390	5	117413810 to 117413822	12	+	TSS region	transcription start site region 48390
Tssr48391	5	117413977 to 117414011	34	+	TSS region	transcription start site region 48391
Ksr2	5	117414000 to 117775003	361003	+	protein coding gene	kinase suppressor of ras 2
Tssr1612	5	117414425 to 117414504	79	+	TSS region	transcription start site region 1612
Tssr48392	5	117414807 to 117414823	16	+	TSS region	transcription start site region 48392
Tssr48393	5	117417688 to 117417709	21	+	TSS region	transcription start site region 48393
Gm42013	5	117482507 to 117486260	3753	-	lncRNA gene	predicted gene, 42013
Tssr52887	5	117484304 to 117484328	24	-	TSS region	transcription start site region 52887
Cpgi16416	5	117493365 to 117493822	457		CpG island	CpG island 16416
Cpgi16417	5	117497057 to 117497428	371		CpG island	CpG island 16417
Tssr48394	5	117509800 to 117509807	7	+	TSS region	transcription start site region 48394
Tssr48395	5	117509942 to 117509954	12	+	TSS region	transcription start site region 48395
Tssr48396	5	117510243 to 117510250	7	+	TSS region	transcription start site region 48396
Gm42550	5	117520699 to 117521658	959	+	unclassified gene	predicted gene 42550
Smmq1	5	117527900 to 117527900	0		QTL	soleus muscle mass QTL 1
Tammq2	5	117527900 to 117527900	0		QTL	tibialis anterior muscle mass QTL 2
Cpgi16418	5	117555197 to 117555462	265		CpG island	CpG island 16418