MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:117190449-117290464

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Taok3	5	117120112 to 117275101	154989	+	protein coding gene	TAO kinase 3
n-R5s174	5	117196555 to 117196675	120	+	rRNA gene	nuclear encoded rRNA 5S 174
Tssr48364	5	117209994 to 117210021	27	+	TSS region	transcription start site region 48364
Tssr48365	5	117210094 to 117210124	30	+	TSS region	transcription start site region 48365
Tssr48366	5	117240449 to 117240464	15	+	TSS region	transcription start site region 48366
Tssr48367	5	117240473 to 117240492	19	+	TSS region	transcription start site region 48367
Tssr48368	5	117240495 to 117240500	5	+	TSS region	transcription start site region 48368
Cpgi16407	5	117240785 to 117241327	542		CpG island	CpG island 16407
Tssr48369	5	117240873 to 117240891	18	+	TSS region	transcription start site region 48369
Tssr48370	5	117240901 to 117240923	22	+	TSS region	transcription start site region 48370
Cpgi16408	5	117250875 to 117251056	181		CpG island	CpG island 16408
Tssr48371	5	117252538 to 117252551	13	+	TSS region	transcription start site region 48371
Tssr48372	5	117256805 to 117256809	4	+	TSS region	transcription start site region 48372
Tssr48373	5	117273780 to 117273808	28	+	TSS region	transcription start site region 48373
Tssr48374	5	117274651 to 117274657	6	+	TSS region	transcription start site region 48374
Pebp1	5	117282651 to 117287564	4913	-	protein coding gene	phosphatidylethanolamine binding protein 1
Cpgi16409	5	117286875 to 117287874	999		CpG island	CpG island 16409
Tssr52881	5	117287589 to 117287623	34	-	TSS region	transcription start site region 52881