Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:116801816-117112098

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43122 5 116642736 to 116830554 187818 - lincRNA gene predicted gene 43122
Tssr48347 5 116802691 to 116802699 8 + TSS region transcription start site region 48347
Gm29843 5 116802696 to 116804286 1590 + lncRNA gene predicted gene, 29843
Tssr48348 5 116802718 to 116802723 5 + TSS region transcription start site region 48348
Tssr48349 5 116802761 to 116802772 11 + TSS region transcription start site region 48349
Gm29926 5 116811231 to 116813828 2597 + lincRNA gene predicted gene, 29926
4930569F06Rik 5 116821454 to 116821886 432 + unclassified non-coding RNA gene RIKEN cDNA 4930569F06 gene
Gm42010 5 116880298 to 116884637 4339 + lncRNA gene predicted gene, 42010
Gm29972 5 116918766 to 116935265 16499 - lncRNA gene predicted gene, 29972
Cpgi16402 5 116956816 to 116957098 282 CpG island CpG island 16402
Gm30028 5 116998130 to 117018073 19943 - lncRNA gene predicted gene, 30028
Tssr52873 5 117004702 to 117004713 11 - TSS region transcription start site region 52873
Tssr52874 5 117004718 to 117004723 5 - TSS region transcription start site region 52874
Tssr52875 5 117004726 to 117004738 12 - TSS region transcription start site region 52875
Gm7478 5 117058812 to 117059392 580 + pseudogene predicted gene 7478
Gm42011 5 117075954 to 117087519 11565 + lncRNA gene predicted gene, 42011
Suds3 5 117091678 to 117115993 24315 - protein coding gene suppressor of defective silencing 3 homolog (S. cerevisiae)
Cpgi16403 5 117103668 to 117103841 173 CpG island CpG island 16403